Gene
RNA
| Item | Value |
|---|---|
| gene id | G137634 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030138.1 |
| NCBI id | CM030138.1 |
| chromosome length | 24262032 |
| location | 21220199 ~ 21221044 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU173083 | True | 368 | lncRNA | 0.53 | 2 | 21220199 | 21221044 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012542 | nr2f5,LOC108433883,LOC107592459,LOC107726692,LOC105005680,LOC107592141,LOC103038004,LOC107671473,LOC100380645,LOC105891836 | coding | upstream | 53422 | 21148238 ~ 21166777 (+) |
| AMCG00012543 | sv2a,LOC107592458,LOC107726650,LOC107671386 | coding | upstream | 107252 | 21109538 ~ 21112947 (+) |
| AMCG00012544 | sv2a,LOC107592174 | coding | upstream | 110951 | 21105119 ~ 21109248 (+) |
| AMCG00012538 | sf3b4 | coding | upstream | 169394 | 21044249 ~ 21050805 (+) |
| AMCG00012540 | NA | coding | upstream | 181770 | 21013421 ~ 21038429 (+) |
| AMCG00012549 | NA | coding | downstream | 79020 | 21300064 ~ 21307188 (+) |
| AMCG00012550 | NA | coding | downstream | 93991 | 21315035 ~ 21317648 (+) |
| AMCG00012553 | NA | coding | downstream | 213401 | 21434445 ~ 21436426 (+) |
| AMCG00012555 | NA | coding | downstream | 217439 | 21438483 ~ 21443188 (+) |
| AMCG00012557 | NA | coding | downstream | 269805 | 21490849 ~ 21491478 (+) |
| G137539 | NA | non-coding | upstream | 462935 | 20757030 ~ 20757264 (+) |
| G137494 | NA | non-coding | upstream | 686240 | 20533752 ~ 20533959 (+) |
| G137364 | NA | non-coding | upstream | 891375 | 20321606 ~ 20328824 (+) |
| G137337 | NA | non-coding | upstream | 982326 | 20170426 ~ 20237873 (+) |
| G137332 | NA | non-coding | upstream | 992163 | 20165283 ~ 20228036 (+) |
| G137631 | LOC107575789 | non-coding | downstream | 10936 | 21231980 ~ 21267912 (+) |
| G137645 | NA | non-coding | downstream | 87174 | 21308218 ~ 21309033 (+) |
| G137669 | NA | non-coding | downstream | 380955 | 21601999 ~ 21602314 (+) |
| G137749 | NA | non-coding | downstream | 559022 | 21780066 ~ 21786045 (+) |
| G137754 | NA | non-coding | downstream | 577459 | 21798503 ~ 21813863 (+) |
| G137633 | NA | other | upstream | 1036 | 21213597 ~ 21219163 (+) |
| G137583 | NA | other | upstream | 160936 | 21056695 ~ 21059263 (+) |
| AMCG00012539 | otud7b,LOC106581836 | other | upstream | 180450 | 20992490 ~ 21039749 (+) |
| AMCG00012523 | NA | other | upstream | 726412 | 20481114 ~ 20493787 (+) |
| AMCG00012521 | NA | other | upstream | 774912 | 20430925 ~ 20445287 (+) |
| G137636 | NA | other | downstream | 3697 | 21224741 ~ 21230836 (+) |
| AMCG00012546 | NA | other | downstream | 24619 | 21245663 ~ 21253003 (+) |
| G137629 | NA | other | downstream | 49316 | 21270360 ~ 21332070 (+) |
| G137644 | NA | other | downstream | 82181 | 21303225 ~ 21316451 (+) |
| G137764 | NA | other | downstream | 633662 | 21854706 ~ 21876542 (+) |
