G137636


Basic Information

Item Value
gene id G137636
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 21224741 ~ 21230836 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173085
TCTGAGTGAGGACTGGATTTTAAAGTCgcctttaaatggaaaaacaaagtagtgtaaacattaaattcagGCACTATAGGCCTACTTTTACTAAATTGTGTCATTGCACAAACcataaaacaatgacaatagAGGTGATTTTTTATATCGTTAAGTAttcatccattttattttgtgatgttCAAAGTAATTCATGAGGTGAACTTAATTGCTTATGCAAAAACCAGAATGTGTGAGCTCTCGGCCGATCAAATCAGCACAGTTCCACTGGCACAATAGATCATTGTTACCCGACACTGACAGGCCTTctcgattattattttttaattcattattcaaattattttcttgccAATTACTTAGAAAGAACATGCcagcatttatattattattgtattattattacactcaGCCACTCCACATCAGCTGCCATGTAAGTCCATTGTGATACTTTGAACATACCTCGCATCTTTGCTCTTCTAGAAACTGGTATTTGTGAGAAatggcagtttattttaaagacttaTGCAGCTCTTAAGAAGAAGAATGGgagttttcttttccttttcttaaagGGGCTGGCCATGCAATTCTGCCCATATCACTTCCCCACATCCCCGTGATGTCCCAGACTTCCACCCTCTCCAAACACACGTGTGTCCATGCCAAATACCATAGTGTGTCCATCATCCTGTGAATGGCAATGATTCCCAAGTGAACACTGAGTCACCTGCAGTAGTTTTCCAGGAGAGAAGCTGAACACAAATTAAGGATTCAAACCAAACACATCTGGGAGCAGCAGTGATAAACCCAGTTGATCAACGGACATGGTCTCATTATCGAGGGTCGGTGTGTTTACACTGCATGTGCTGTGTCCTCTAAGACAGCTGGAGGGGTCATCTGGGAGTCAACAGCAGGAAGGGGCAGGAGAGAAGAGAAGGTCATGCAGAGTCCAACAGCACCGAGGACACAGAAGGGACAGTGTATACAGTACAAATCAGATCCTTGTTACTGGAGGATAACAGTGTTGCCTTATTCCAATTTTTGGGAGAAAttggaatgttaaaaaaaacacatttgaagcaTTTGTTCGGGAGTTTTCACTCTTAATATGCTATACAATGCTATATCTTTTAATTTCTGGCATTTGGAAAAACTTGGGTTGAATTACAGTGCGTGACAACTGCTTTGGCTGATGAATGGCGATGTATTCACTACACCCAATGAAGGAGACCCATTATTTCAGAACATCTCGGCTCTCTTAGCCTctgctggtttgttctcaggtCAGCAGTAGTGTAGCCAGACAATTTATTTTCCAGGGGTTCAAGGGTAAGAAAATTAACAATGATGAAACTATAGATTCCAGTAATGCCATCGTAGCTTTGCAGTGCACAGTGAGACTCTCTGAAAGGGGGTGGTGGTTGTGTTGTGAGATGATCAGAATAATGGTTTCTCACTTGCTTTCTCTGATGAGGCGGGCTGGGGAGGTGGTCAACATTTCTACAACTTCACCGAAATGTGCGACTGGAGATGGTAGCCCCCTTAGGCTAGGCCACTGCaagtcagtgtctgtgtttgaacACTAGTTGGGAAAGCAGGGTTCTGGGCACCGGGATCTATGAACCACTGACCCTTTAGCTGCTCTTTATGAAGGGTGTTTACATGGACATCATTATTCAAATGACAGCAGCCAAGAGATGTTCACAATCATGTTTACAATCTCACGGGGACTCACAGATTAGTCATAAGATTTCCCATCCACCCCTTTTCGAAAGATACTCCTAATAAAATGTCAGTTCAGTTTGCTTTTCACACGCAGATCATATTGacaaatgtgttgtttcagTGGATCCTAACCCTGGTCTAGGAGGCTCCCTGTTTCTGCTGGTTTCCATTCCAGACCCATTCTTCCCTACTGACCTGACTGCACATGTTtaagaactgaaaacaaaggcCAAAGGCTGATACAAGACCATCATTAGTTCAGGTAAGGACACAGTGAAGAGCTCAATCCTCCAGGCGCAGGAATGGCAACCACTGCATGATTTGAATCGAGACATACAGTCAAGGTCAAGTCTGTTACCAACCCGTGTCCTAGAATTTGAACTACTTTTCTTGATTTCCTTTGGTTGACACTTTTTGTCAGCCACTTCTTCCCTCAGGCATCTGACTGCCCCAGactctcctctctgctctctgcccCATAGTGTGGATGAGCCTCAGCACTGCAGTGTCTGACCATCCTCCCAGGACCTCAGTTTGGATTGCACCTGTAGACCATTCTGATTTCTCATCAACCTTCATGTTCTGCactgtcattatttattaatatagtgATGCTCTTATCTTTCTATTGCTGTGTACATGTAGACAACTGTATGTTAGTGCATTTTACAACCATTAACCATttagcatctgctaaatgacttccataatactaatataaaaagTCATTTCCTCTGACATAATAAGACAAgatgttaaaatatgttaaaaccaccaccaaacaaaacaaaacaaaacagaaaacagaatgaGGAAGAACATGTTGAAAATCACACCATCTCGTTACATGGACACAAAGGATATTCCAAAGCTGACATTTTCCAAATTTCCGAGAGTGTCAAAGTTCTCTTTCCCCGGCTACACAACCTGCTTTAAAAGAGACGTCAGTAAACGGGCTTCAGATGAGCAGACATTGAGAAGAAACTACAGAAAAGCAGTCATCCAGGTAGTGTCTCTAGTGTACTTTCAATGTCTCAGTGGTCCCGTCTCTCGctcacaacccccccacctcacccTCCATAATCAGCCTATGGCTCTGTCACTCTGTGTCCTGCGGAGGGGTGAGGTTGTGAAGACCACTCTCTGTCCGGCACTGGCTGGTGGGACGGCGCGCTGCTAGGCTGTGTTGCTGGCTGAGGGCTGGCCCCATACTGGATGACAATCACAGGCCAGACAAGCAGTCTTCTTCTGCTTCTCCCCCGCAATACTCAGAGCCCCCGAGATGATGTACTAGAGAGAAAAATCATATATCAACCACATCACAAGCCTTTACTTCATGTTCAACATTCATCATAGTGTGGAATGTGAAATCGATGGCTTGGGTGGGTTGGATGCTTTGACATGTAATTGATCTGTGGAGCTGCTTTAAGTATATTGAGTGGTGTGATACGTGTGCAACGTGTGTACAGtcaggtgtgtgtctgtaatcACAGCGAGAGTGACAGTCACAAGCTGCACAAGTGTATTGCtgataaaagtaattttaaaaaggcgATCTGATCTGCAGTTGTTTGATCAGCCATAAAAGGAACCAAAAGAGTATTTCAAGATCTAATAGAGACGGTGAACTGCTGTAacccatttcattttgaattgatAAAATTGGCACTTACTATCAGTGATGGCCAAAATGGGAGCCCGATGTGAAACCCTATGCTGTCCATTTCTCTTTCCACAAGAACTCCAGAGCCTACATTAAACAGTCCAATCATGATCTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173085 True 3508 TUCP 0.43 3 21224741 21230836

Neighbor

gene id symbol gene type direction distance location
AMCG00012542 nr2f5,LOC108433883,LOC107592459,LOC107726692,LOC105005680,LOC107592141,LOC103038004,LOC107671473,LOC100380645,LOC105891836 coding upstream 57964 21148238 ~ 21166777 (+)
AMCG00012543 sv2a,LOC107592458,LOC107726650,LOC107671386 coding upstream 111794 21109538 ~ 21112947 (+)
AMCG00012544 sv2a,LOC107592174 coding upstream 115493 21105119 ~ 21109248 (+)
AMCG00012538 sf3b4 coding upstream 173936 21044249 ~ 21050805 (+)
AMCG00012540 NA coding upstream 186312 21013421 ~ 21038429 (+)
AMCG00012549 NA coding downstream 69228 21300064 ~ 21307188 (+)
AMCG00012550 NA coding downstream 84199 21315035 ~ 21317648 (+)
AMCG00012553 NA coding downstream 203609 21434445 ~ 21436426 (+)
AMCG00012555 NA coding downstream 207647 21438483 ~ 21443188 (+)
AMCG00012557 NA coding downstream 260013 21490849 ~ 21491478 (+)
G137634 NA non-coding upstream 3697 21220199 ~ 21221044 (+)
G137539 NA non-coding upstream 467477 20757030 ~ 20757264 (+)
G137494 NA non-coding upstream 690782 20533752 ~ 20533959 (+)
G137364 NA non-coding upstream 895917 20321606 ~ 20328824 (+)
G137337 NA non-coding upstream 986868 20170426 ~ 20237873 (+)
G137631 LOC107575789 non-coding downstream 1144 21231980 ~ 21267912 (+)
G137645 NA non-coding downstream 77382 21308218 ~ 21309033 (+)
G137669 NA non-coding downstream 371163 21601999 ~ 21602314 (+)
G137749 NA non-coding downstream 549230 21780066 ~ 21786045 (+)
G137754 NA non-coding downstream 567667 21798503 ~ 21813863 (+)
G137633 NA other upstream 5578 21213597 ~ 21219163 (+)
G137583 NA other upstream 165478 21056695 ~ 21059263 (+)
AMCG00012539 otud7b,LOC106581836 other upstream 184992 20992490 ~ 21039749 (+)
AMCG00012523 NA other upstream 730954 20481114 ~ 20493787 (+)
AMCG00012521 NA other upstream 779454 20430925 ~ 20445287 (+)
AMCG00012546 NA other downstream 14827 21245663 ~ 21253003 (+)
G137629 NA other downstream 39524 21270360 ~ 21332070 (+)
G137644 NA other downstream 72389 21303225 ~ 21316451 (+)
G137764 NA other downstream 623870 21854706 ~ 21876542 (+)
G137775 NA other downstream 701459 21932295 ~ 21958158 (+)

Expression


Co-expression Network