G137951 (LOC100846954,LOC107575789)


Basic Information

Item Value
gene id G137951
gene name LOC100846954,LOC107575789
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 22921189 ~ 22922372 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173477
CACTCCTTTGtcgccttggctgtgtgttttgggtcattgtcatgctggaatacccatccacgacccattttcaatgccctggctgagggaaggaggttctcacccaagatttgacggtacatggccccgtccatcgtccctttgatgcggtgcagttgtcctgtccccttagcagaaaaacacccccaaagcataatgtttccacctccatgtttgacagtggggatggtgttcttggggtcattcctcctcctccaaacacggcgagttgagttgatgccaaagagcttgattttggactcatctgaccacaacgctttcacccagttctcctctgaatcattcagatgttcattgacaaacttcaggccatggtggagagtttggaatctgattgattgattgcttctgtggacagttgtcttttatacaggtaacga
>TU173479
gcatttcaaaaaagttataaattgatttgcatgttaatgagggaaataagtatttgaccccttcaacttagtacttggtggcaaaacccttgttggcaatcacagaggtcagacgtttcttgtagttggccaccaggttcctcaccgttctcatgatcattgaaactccacgaggtgagatcttgcatggagccccagaccgagggagactgacagttattttgtgtttcttccatttgcgaataatcgcaccaactgttgtcaccttctcaccaagctgcttggcgatggtcttgtagcccattccagccttgtgtaggtctacaatcttgtccctgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgattgcttctgtggacagttgtcttttatacagcactcccttaaagagagtgctc

Function

NR:

description
rho GTPase-activating protein 21 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173477 False 440 lncRNA 0.49 2 22921509 22922336
TU173479 True 452 lncRNA 0.45 3 22921189 22922372

Neighbor

gene id symbol gene type direction distance location
AMCG00012581 NA coding upstream 58366 22860079 ~ 22862823 (+)
AMCG00012576 NA coding upstream 251845 22665481 ~ 22669344 (+)
AMCG00012577 NA coding upstream 332984 22585701 ~ 22588205 (+)
AMCG00012571 NA coding upstream 465628 22452135 ~ 22455561 (+)
AMCG00012570 NA coding upstream 491129 22390202 ~ 22430060 (+)
AMCG00012580 NA coding downstream 13898 22936270 ~ 22950900 (+)
AMCG00012578 NA coding downstream 38826 22961198 ~ 22966195 (+)
AMCG00012583 NA coding downstream 120116 23042488 ~ 23092426 (+)
AMCG00012585 NA coding downstream 264515 23186887 ~ 23230915 (+)
AMCG00012586 NA coding downstream 495229 23417601 ~ 23422278 (+)
G137851 NA non-coding upstream 594839 22308413 ~ 22326350 (+)
G137827 NA non-coding upstream 844319 22075843 ~ 22076870 (+)
G137814 NA non-coding upstream 915511 22005381 ~ 22005678 (+)
G137761 NA non-coding upstream 962835 21836242 ~ 21958354 (+)
G137754 NA non-coding upstream 1107326 21798503 ~ 21813863 (+)
G137984 NA non-coding downstream 135714 23058086 ~ 23058391 (+)
G138010 NA non-coding downstream 240619 23162991 ~ 23163619 (+)
G138034 NA non-coding downstream 353292 23275664 ~ 23275950 (+)
G138042 NA non-coding downstream 876234 23798606 ~ 23843211 (+)
G138118 NA non-coding downstream 997704 23920076 ~ 23921869 (+)
AMCG00012579 NA other upstream 9533 22880359 ~ 22911656 (+)
G137947 NA other upstream 102731 22817953 ~ 22818458 (+)
G137899 NA other upstream 355083 22565424 ~ 22566106 (+)
G137775 NA other upstream 963031 21932295 ~ 21958158 (+)
G137764 NA other upstream 1044647 21854706 ~ 21876542 (+)
AMCG00012593 NA other downstream 775052 23697424 ~ 23742591 (+)

Expression


Co-expression Network