G137981


Basic Information

Item Value
gene id G137981
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23004010 ~ 23029222 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173515
ttagaaatgttaatctgtgattcataactctagaatgtgtaatatcatttagttttcttaaatataaatgtgtgttgcattaaactgttttgttgataattttagaaataaaatctgtcaacggcgagaaatatcttctcattcctgtttaactgtttagtctgaaattgacacaagttaatagacattagattagtggtggccctgcctatccttaatcattgaataataatcagttaagggaaattgtggtaacaagtaatgataggatctttctcggcacctaaacgtaaatgagactgatatatatataatgagaagtTACctgacataaatactaacctgtgtagttatttaatgtctgactaacaatactaatgagagactcaccttcgtcttactaaccggtattgtagtcaatgtgtttataactttttttgtttaacgatttgtgtgttatcatatgcgatcccatggtctttgatttggtcacggaagtgatttgtctttgatttgttgatctagagttgaattttaattagtttttcccttttgtataattagtgtagtgctacatttagtctttgtttttgaataaatttgacaatttatatctttggaattggtgtctgcgtccaattattacagaaattgagttctacaagattccaggattcgtgataaggtgatactataaattcacttccttaattgaaatttataagtgt
>TU173518
ttagaaatgttaatctgtgattcataactctagaatgtgtaatatcatttagttttcttaaatataaatgtgtgttgcattaaactgttttgttgataattttagaaataaaatctgtcaacggcgagaaatatcttctcattcctgtttaactgtttagtctgaaattgacacaagttaatagacattagattagtggtggccctgcctatccttaatcattgaataataatcagttaagggaaattgtggtaacaagtaatgataggatctttctcggcacctaaacgtaaatgagactgatatatatatataacgagaagttacctgacataaatactaacctgtgtagttatttaatgtctgactaacaatactaatgagagactcaccttcgtcttactaaccggtattgtagtcaatgtgtttataactttttttgtttaacgatttgtgtgttatcatatgcgatcccatggtctttgatttggtcacggaagtgatttgtctttgatttgttgatctagagttgaattttaattagtttttcccttttgtataattagtgtagtgctacatttagtctttgtttttgaataaatttgacaatttatatctttggaattggtgtctgcgtccaattattacagaaattgagttctacaagattccaggattcgtgataaggtgatactataaattcacttccttaattgaaatttataagtgt
>TU173519
ttagaaatgttaatctgtgattcataactctagaatgtgtaatatcatttagttttcttaaatataaatgtgtgttgcattaaactgttttgttgataattttagaaataaaatctgtcaacggcgagaaatatcttctcattcctgtttaactgtttagtctgaaattgacacaagttaatagacattagattagtggtggccctgcctatccttaatcattgaataataatcagttaagggaaattgtggtaacaagtaatgataggatctttctcggcacctaaacgtaaatgagactgatatatatatatatataacgagaagttacctgacataaatactaacctgtgtagttatttaatgtctgactaacaatactaatgagagactcaccttcgtcttactaaccggtattgtagtcaatgtgtttataactttttttgtttaacgatttgtgtgttatcatatgcgatcccatggtctttgatttggtcacggaagtgatttgtctttgatttgttgatctagagttgaattttaattagtttttcccttttgtataattagtgtagtgctacatttagtctttgtttttgaataaatttgacaatttatatctttggaattggtgtctgcgtccaattattacagaaattgagttctacaagattccaggattcgtgataaggtgatactataaattcacttccttaattgaaatttataagtgt

Function

GO:

id name namespace
GO:0017119 Golgi transport complex cellular_component
GO:0099023 vesicle tethering complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173515 False 728 lncRNA 0.30 2 23004010 23029222
TU173518 False 730 lncRNA 0.30 2 23004010 23029222
TU173519 True 734 lncRNA 0.30 2 23004010 23029222

Neighbor

gene id symbol gene type direction distance location
AMCG00012575 NA coding downstream 226326 22719338 ~ 22777684 (-)
AMCG00012573 NA coding downstream 363814 22631943 ~ 22640196 (-)
AMCG00012574 NA coding downstream 395854 22602178 ~ 22608156 (-)
AMCG00012572 NA coding downstream 402842 22588140 ~ 22601168 (-)
AMCG00012565 NA coding downstream 838272 22152419 ~ 22165738 (-)
AMCG00012584 NA coding upstream 151982 23181204 ~ 23185663 (-)
AMCG00012587 NA coding upstream 228061 23257283 ~ 23488884 (-)
AMCG00012590 NA coding upstream 504373 23533595 ~ 23598058 (-)
AMCG00012597 NA coding upstream 923910 23953132 ~ 23976623 (-)
G137944 NA non-coding downstream 219067 22784737 ~ 22784943 (-)
G137941 NA non-coding downstream 232762 22770924 ~ 22771248 (-)
G137934 NA non-coding downstream 279776 22723977 ~ 22724234 (-)
G137870 NA non-coding downstream 677663 22308441 ~ 22326347 (-)
G137847 NA non-coding downstream 822971 22180831 ~ 22181039 (-)
G137986 NA non-coding upstream 36909 23066131 ~ 23066469 (-)
G138011 NA non-coding upstream 133880 23163102 ~ 23163391 (-)
G138085 NA non-coding upstream 667533 23696755 ~ 23764819 (-)
G138120 NA non-coding upstream 866818 23896040 ~ 23935478 (-)
G138142 NA non-coding upstream 974056 24003278 ~ 24085235 (-)
AMCG00012566 NA other downstream 883454 22103653 ~ 22120556 (-)
AMCG00012564 NA other downstream 915541 22078173 ~ 22088469 (-)
AMCG00012559 NA other downstream 1368584 21433664 ~ 21635426 (-)
AMCG00012556 NA other downstream 1501811 21494227 ~ 21502199 (-)
AMCG00012541 NA other downstream 1961567 21040089 ~ 21042443 (-)
G137996 NA other upstream 74245 23103467 ~ 23120688 (-)
AMCG00012594 NA other upstream 744255 23773477 ~ 23776880 (-)
G138207 NA other upstream 1205282 24234504 ~ 24234867 (-)

Expression


Co-expression Network