G138010


Basic Information

Item Value
gene id G138010
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23162991 ~ 23163619 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173550
aGAGCTTTTACTGCAAAACCAGCCGCTATGATCCGTCCTCTGatgaggagcagcgactgtgggtttggattgtgtttctgttaaaaACGGAGACACGAAACACTACAGCGACACAGCCTGAGTGGACaggactttgtgtctgttttattatttgtgctttacatgattttaaacagcgtaataaatacatgtttctgttaaagatattaggaagagctaaacgtgtagacatcattatattcagacaagcatgttcacataaaaatacatttccatgtgcaacaataatactaaatagcaaatatgtattgttattattatcgtcatcatttgtgctagtatatatgtattttaaacggcacagcgtgactcccttaacttattactcttactacagatttgtaagtgcaaacaatactttttgccgtattatttataatgtacttatcagacaTTCTTAACCAGGGCAcgttacagctgaaacaaaatacacacgtttcacgattaatcatccaaaTGCAATATAGCAtcttataattgaactaaagtgtgcacgtctcagtcatggcgtttatggacgcatttattaatcccgtccttaatgttttagagggaaacccagatctgct

Function

NR:

description
PREDICTED: IQ motif and SEC7 domain-containing protein 2-like isoform X1

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU173550 True 629 lncRNA 0.36 1 23162991 23163619

Neighbor

gene id symbol gene type direction distance location
AMCG00012583 NA coding upstream 70565 23042488 ~ 23092426 (+)
AMCG00012578 NA coding upstream 196796 22961198 ~ 22966195 (+)
AMCG00012580 NA coding upstream 212091 22936270 ~ 22950900 (+)
AMCG00012581 NA coding upstream 300168 22860079 ~ 22862823 (+)
AMCG00012576 NA coding upstream 493647 22665481 ~ 22669344 (+)
AMCG00012585 NA coding downstream 23268 23186887 ~ 23230915 (+)
AMCG00012586 NA coding downstream 253982 23417601 ~ 23422278 (+)
AMCG00012588 NA coding downstream 321999 23485618 ~ 23516382 (+)
AMCG00012589 NA coding downstream 390441 23554060 ~ 23561816 (+)
AMCG00012591 NA coding downstream 464841 23628460 ~ 23649841 (+)
G137984 NA non-coding upstream 104600 23058086 ~ 23058391 (+)
G137951 LOC100846954,LOC107575789 non-coding upstream 240619 22921189 ~ 22922372 (+)
G137851 NA non-coding upstream 836641 22308413 ~ 22326350 (+)
G137827 NA non-coding upstream 1086121 22075843 ~ 22076870 (+)
G137814 NA non-coding upstream 1157313 22005381 ~ 22005678 (+)
G138034 NA non-coding downstream 112045 23275664 ~ 23275950 (+)
G138042 NA non-coding downstream 634987 23798606 ~ 23843211 (+)
G138118 NA non-coding downstream 756457 23920076 ~ 23921869 (+)
G138209 NA non-coding downstream 1073043 24236662 ~ 24236977 (+)
G138212 NA non-coding downstream 1077520 24241139 ~ 24241424 (+)
AMCG00012579 NA other upstream 251335 22880359 ~ 22911656 (+)
G137947 NA other upstream 344533 22817953 ~ 22818458 (+)
G137899 NA other upstream 596885 22565424 ~ 22566106 (+)
G137775 NA other upstream 1204833 21932295 ~ 21958158 (+)
G137764 NA other upstream 1286449 21854706 ~ 21876542 (+)
AMCG00012593 NA other downstream 533805 23697424 ~ 23742591 (+)

Expression


Co-expression Network