G138085


Basic Information

Item Value
gene id G138085
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23696755 ~ 23764819 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173682
tgctattttaTTAAAGAGCCAAAAATGCAGGTACACTTACACAGAcatctaaaacaaaatgataatgaaaatgaacatggAAGTTAATACAAtgcccaaaacaaaacaaaaaaacactatgcACTACAATCATTCTTCAGTCCAATCCTATCTTCACTGTACATACACGGTATATTCTGGAATCTAAACAGTAACATACaattggaaagaaaaagaaaagaaggaaaactaGTAAAACCTCTACatgtttgattttataattatgCTTTAGCCTTGGAATGCATaactattaaattatatttaaaatctgcCAAAGCTCttgaatgaaaatggaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa

Function

GO:

id name namespace
GO:0002376 immune system process biological_process

KEGG:

id description
ko04612 Antigen processing and presentation
ko05310 Asthma
ko05330 Allograft rejection
ko05332 Graft-versus-host disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU173682 True 370 lncRNA 0.27 2 23696755 23764819

Neighbor

gene id symbol gene type direction distance location
AMCG00012590 NA coding downstream 98697 23533595 ~ 23598058 (-)
AMCG00012587 NA coding downstream 207871 23257283 ~ 23488884 (-)
AMCG00012584 NA coding downstream 511092 23181204 ~ 23185663 (-)
AMCG00012582 NA coding downstream 691521 22881459 ~ 23005234 (-)
AMCG00012575 NA coding downstream 919071 22719338 ~ 22777684 (-)
AMCG00012597 NA coding upstream 188313 23953132 ~ 23976623 (-)
G138011 NA non-coding downstream 533364 23163102 ~ 23163391 (-)
G137986 NA non-coding downstream 630286 23066131 ~ 23066469 (-)
G137981 NA non-coding downstream 667533 23004010 ~ 23029222 (-)
G137944 NA non-coding downstream 911812 22784737 ~ 22784943 (-)
G137941 NA non-coding downstream 925507 22770924 ~ 22771248 (-)
G138120 NA non-coding upstream 131221 23896040 ~ 23935478 (-)
G138142 NA non-coding upstream 238459 24003278 ~ 24085235 (-)
G138176 NA non-coding upstream 335350 24100169 ~ 24139567 (-)
G138178 NA non-coding upstream 349385 24114204 ~ 24114849 (-)
G138210 NA non-coding upstream 471843 24236662 ~ 24236924 (-)
G137996 NA other downstream 576067 23103467 ~ 23120688 (-)
G137974 LOC107575789 other downstream 647377 22921883 ~ 23049378 (-)
AMCG00012566 NA other downstream 1576199 22103653 ~ 22120556 (-)
AMCG00012564 NA other downstream 1608286 22078173 ~ 22088469 (-)
AMCG00012556 NA other downstream 2194556 21494227 ~ 21502199 (-)
AMCG00012594 NA other upstream 8658 23773477 ~ 23776880 (-)
G138207 NA other upstream 469685 24234504 ~ 24234867 (-)

Expression


Co-expression Network