G138120


Basic Information

Item Value
gene id G138120
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 23896040 ~ 23935478 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173723
tctaaatatgaatacatcCATCACTTGAAATGATACACACAATTCTactaaattatttgtttttattcttgaaatgtaaatacatcccttgctttgttttcactttgtCAATTATTAAACTTGGTTTAGCACTACACCCCCCATGAGACAAATCACACATCCTTCAGCTCACATACTACATaagccattttattattaatcttgtATTAATGGCCAGTGGAAGTGGTGTATCCTCACACTatgacattttgacatttatgaacattttctgcTTCAATTACATTCTTTAAACACCAGTTGAAACACTGTGATATTTCTGCTGTATGAATTGTCCAATGTTCTTCAACATGTGTTCTGCAGTTAAAACAGCAGTATTGTTTCTGTGGTGTGTGGATCTCATACATGTTTGATGGTGAAATTATAGGTCGAAACTTTTCTCATAGTGAAAGTAGTAAAtctattatgtttttgtgtgacGTCGCTGATGTGTTTTAAGACGTCCTGCCACACTAAAAGTCTTCCCACACTGAGAGCAACtgaatggtctctctcctgtgtgaattaATTGGTGTGTTTTAAGTTCTGTTGATGTCTTGAAAGATTTCCCACATGGAGGGCAGCAGAAtagtttctctcctgtgtgaattcgCTCATGTCGTTTACgagatccttgatcactgaacGTCCTCCCACATTGGAAGCAAGGGTATGGcttttctcctgtgtgaatATACTTGTGTGTTTTGAGAGTACGTAAATGACTGAAAGATTTCCCACATAGGGAACAGGAGTATGGTTTCTCCCCTGTATGAACTCTCTCATGTGCTTTAAGACCTCCTGATTGAATGAAAGTCTTCCCACACTGGTGGCAGCAGTATGGTTTCTCCCCTGTATGAACTCTCTCATGTGCTTTAAGTCCTCCTAACCGGTTGAAAGTCTTCCCACACTGTTGACagctgtatggtttctctcctgtgtggatTCGCTCATGCTTTTTAAGAGCTACTGCTAGATTAAAAGTTCTCCCACAGTGGGAGCAGCAGTACTGTTGTCCCTCTCCTATATGAATTGTCTTGTGGCTTGTAAGACTACTTAAATCACTAAAAGTCTTCCCACATTTGAAGCAGCCGTAAGTTCCATCTTCTGAATGAACAAGTCTGTGTGTTTTAAGACTAATTGATCTTTTAAAACTCTTTCCACATTGGGAGCAGCTAAACGGTTTCTCTCCAGTGTGAATAAGCTGATGTCTTTTAAGATTTCCTGAAAGGGTGAAAGTCATGCCACACTGGGAACAGCTGTATGGTCTCTCCCCTGTGTGAATTTGCATGTGTAATTTAAGACTACTTGCTGCACTGAAAGTCTTTCCACACTGGGAGCATTGGTGTGGATTCTCTCCTGTATGGATATGCTCATGCGACTTAAGACTTTTAGCATCCCTAAAAGTGTTAGAACACTGACTACAGCTNNatggtctctctcctgtgtgaatccGCTCATGAACTTTAAGACTGTCTGTACGACGGAATGTCTTCTCACAATAGGAACAGCAATGTGTTCTCCATCCAGTGTGAGTTCGCTCATGAGATTTAAGTCCCGTTTCCTGACTGAAAGCCTCCCCACACTGTCGACAGCTGTACGGCCTCACATCCGAGTTAATTTCTTGATGGTTTTTAAGTGTACTTAACATGTCAGTCAGTTGGTGTGTTGCACTCCCACTGGGGGTAAAGTGGTATGTACCATCTCCTTGATATTTGAGCAGGAGGAATGGATTTTGGGGCACTATAATTGATTGGCATGTCTGCGTGTGTAAAGCAGACACTGCTGTATTGGCACTCACAAGCAATGAAGTGGGAGTGAGTGTGTAAGAGGGTCCTGGAGGTTGCGGAGTGAGTGATGTGGAAGCTTTCACTGCACTCTGACAAAGTCCAACATCACTTTCTTTAGATTCCTTCATTCCCACATGCGAAACAGTAACGACCTCGCTTGCACATGTATCAGATTTCATGTGATCAGGGCCTAGCATGGGCTCAATCTTTATTTCATCAGAGCACTGAACTTCAGTGTCAACAGGGTGAAAGTCCTCTTCTGATTTTATTACATCTAGTTCACTCATGTCTTGTAAAATTTGGTTACACACCAGAGCAGATTTATTTCAGTCCATCTATGTCAAGTTCAGATTGTATTTAAGAATGTTCCATCTCCATCGGCAAACCCTTCTAgaatggaacaaaaaaaagtctattCTGTGAAATCAGTAGTGTACAGAGTCTTGGCAGGATcagatttgtatatattgagTCCCTTTGTAACATTTACAGATCATGGTGTATCCCGTCTCTGGCTCTTCCTGGTGATCAATAATATCCTATTTTGAACGTTCCTGTGCTGCTCAGTAAGTTCCAGTTTGTCTTCACTATGTCAACTGTATGTGAACCAACACTCTCTCAGGGTCACTCAAAGTAGTTTCCACAGGTCGAGAAAGGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173723 True 2485 lncRNA 0.41 2 23896040 23935478

Neighbor

gene id symbol gene type direction distance location
AMCG00012590 NA coding downstream 297982 23533595 ~ 23598058 (-)
AMCG00012587 NA coding downstream 407156 23257283 ~ 23488884 (-)
AMCG00012584 NA coding downstream 710377 23181204 ~ 23185663 (-)
AMCG00012582 NA coding downstream 890806 22881459 ~ 23005234 (-)
AMCG00012575 NA coding downstream 1118356 22719338 ~ 22777684 (-)
AMCG00012597 NA coding upstream 17654 23953132 ~ 23976623 (-)
G138085 NA non-coding downstream 131221 23696755 ~ 23764819 (-)
G138011 NA non-coding downstream 732649 23163102 ~ 23163391 (-)
G137986 NA non-coding downstream 829571 23066131 ~ 23066469 (-)
G137981 NA non-coding downstream 866818 23004010 ~ 23029222 (-)
G137944 NA non-coding downstream 1111097 22784737 ~ 22784943 (-)
G138142 NA non-coding upstream 67800 24003278 ~ 24085235 (-)
G138176 NA non-coding upstream 164691 24100169 ~ 24139567 (-)
G138178 NA non-coding upstream 178726 24114204 ~ 24114849 (-)
G138210 NA non-coding upstream 301184 24236662 ~ 24236924 (-)
G138211 NA non-coding upstream 305290 24240768 ~ 24240976 (-)
AMCG00012594 NA other downstream 119160 23773477 ~ 23776880 (-)
G137996 NA other downstream 775352 23103467 ~ 23120688 (-)
G137974 LOC107575789 other downstream 846662 22921883 ~ 23049378 (-)
AMCG00012566 NA other downstream 1775484 22103653 ~ 22120556 (-)
AMCG00012564 NA other downstream 1807571 22078173 ~ 22088469 (-)
G138207 NA other upstream 299026 24234504 ~ 24234867 (-)

Expression


Co-expression Network