G138176


Basic Information

Item Value
gene id G138176
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 24100169 ~ 24139567 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU173792
acaaaatgttcacttgctgtctaatatatcccacccactgacagatgccatgataacgagattatcagtgttattcacttcacctgttagtggttatggctgatcggtgtatatttatacagaagctttggacttttccacatgttattgtgttcatttcacatttcaggagtttttgccactgatcaacacagaaaatgtccataatgtcaatgtgaaaactataattgtataattgttctaaattaattacaaatacaaaacagaaaataatttaatgcataTGTAATCATCCCATTTGCTAtgacacctgattgagctgtgatgaaaccaattgtctttagaagtcacaaaattagttgaatggagtccacttccagcaattaaggtgtgtcacatcatttcaggttaaatacacttGTCTCGGGGATGttccacagttggttagtacaattcctaacaaagactgcatcatgaagacaaaggaacagtcaatgcaaatctggaataaggaTCTTCAAAATCACCAATCGGGTAGGATATATGAACAGTGaaatccattattaagaaatggagagaatatggcacaactgtgaatctgcctagatcaggccatcctcaaaaactgagtatccagGTGAGAAGGGCACTAATCAgggagaccactcccatcaaaTCTGGTCTAGAGTTTCCCAGAAGAGCATCAATGCTTAGCGCTATGTTTGGTGCAAACCTAACAtggcacatcatcctgagaatggcatccctactgtgaagcatggtggtggcagcatcatgctatggggatgcttctcagggcccttgtaaagatagagggcaaaatggatgcagcaaagtacagagaaatcctggcaGAAaatctgcaagagacctgggactggggagaagattaatcttccaccAGGACAATGAGCCCAACCATATAGCCAAACCCACACTGGagtaacttaaaaacaaaaaggtcaatgtcctgcagtggcccagtcaaagtccggacctcaatccaattgagattatgtggaaagagttgaaaggtcctcatccaacttgatggagcttgagcaattttgcgaAGAAGATTGGGCAAATaatgctgtgtccagatgtgcagaGCTGGTAGAGACtcatccacatagactcatggctgtaattgctgccaaagttGCCTGTACCAAATagtgactgaagggggtgattaattatgctttcaattattttatgtatttgttattaatttagaaTGATTTGCAGATGCGTGTGTGcatgcccagcgatggactggcgtcccatcctgggtgtattcctgctttcgaaaatggatgaatggatgatttgcagattatatttttcactttgacattatggacattttctgtgttgatcagtggcaaaaactcctgattaaattatttctgatttcaagctgtaacacaatgaaaagtGGAAAAGCCcaagggggggtgaatacttttgagagccaatGTGTATATgggtatatacagttaggtctataaatatttggacagtgacatgaTTGTCAtcatgtcactgtccaaatatttatagatgtagcatgttatggcatggacatgtatggctgccaagggaactggttcccttgtatttattgattatgtgactgtttagggctatattatctgctctgattcagccaaatgcttcaaaactcattggatggtgcttcacagtgcagatggacagtgacccaaagcatactgcgaaagcaacccaagacttttctTTAAGGtaaagtggaatgttctgcaatggcaagtcaatcacctgacctgaatccaattgaacatgcatttcacttgctgaaggcaaaacgccccacgaacaagcaggaactaaagacagctgaagttcaggcctggcagagcatcaccagggaagaaacccagcatctggtgatgtcaatgggttccagacttcaggcagtcttTGACTGCAAAgtatttgcaaccaagtattgaaactcacaatgtaatccatgttagtttgtccaattgcTTTTGAGCCCcaaaaattggggggaccacctatacaaatgggtataattcctacaccattcacccaatttggatgtaactaccctcaaattatagatgaaagtctacagtctgttcctttcaaatccattgtggtggcagacagagccaaaatgatgtcAATTGTATCAGTGTCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU173792 True 2232 lncRNA 0.41 2 24100169 24139567

Neighbor

gene id symbol gene type direction distance location
AMCG00012597 NA coding downstream 123546 23953132 ~ 23976623 (-)
AMCG00012590 NA coding downstream 502111 23533595 ~ 23598058 (-)
AMCG00012587 NA coding downstream 611285 23257283 ~ 23488884 (-)
AMCG00012584 NA coding downstream 914506 23181204 ~ 23185663 (-)
AMCG00012582 NA coding downstream 1094935 22881459 ~ 23005234 (-)
G138142 NA non-coding downstream 14934 24003278 ~ 24085235 (-)
G138120 NA non-coding downstream 164691 23896040 ~ 23935478 (-)
G138085 NA non-coding downstream 335350 23696755 ~ 23764819 (-)
G138011 NA non-coding downstream 936778 23163102 ~ 23163391 (-)
G137986 NA non-coding downstream 1033700 23066131 ~ 23066469 (-)
G138210 NA non-coding upstream 97095 24236662 ~ 24236924 (-)
G138211 NA non-coding upstream 101201 24240768 ~ 24240976 (-)
AMCG00012594 NA other downstream 323289 23773477 ~ 23776880 (-)
G137996 NA other downstream 979481 23103467 ~ 23120688 (-)
G137974 LOC107575789 other downstream 1050791 22921883 ~ 23049378 (-)
AMCG00012566 NA other downstream 1979613 22103653 ~ 22120556 (-)
AMCG00012564 NA other downstream 2011700 22078173 ~ 22088469 (-)
G138207 NA other upstream 94937 24234504 ~ 24234867 (-)

Expression


Co-expression Network