AMCG00012621


Basic Information

Item Value
gene id AMCG00012621
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 8500 ~ 15409 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012621
ATGGTTGAGCCTGCGATGCCTAAGGCAGACCTGCCCGCCTATTTAGCATCTTTAGCTTTGACTAGGCAAAGAAAGCACAGAAAAAATAACGAACCACCCACTGACGATCACAAACCAGAGGATGTGTCATCGCAGGAGGATGCTTCTTGGCTGCAGTGGTGGAAAGCCACTTTAAATTTCAATGAATACCTGAAGTACATCTCATCTCAGGATTCCGAACACCTTGGAGTTATTTTTCACTTGTACAACAGCGATGATAGCGACGAAGAAGACAAACAAAGGAAAGCTCTTGCTCTTCAGCTGGAAGAGAAGGAGAAAATGAAGAGAGAGGAGATGAATGCCCTGAAGACCCAGAAGCAGGCATATGTGGCCGGGATGTGGAATGTAAACTCGGTTTTGCTTGGAGGTCTTGGGAAGGAACCAGTATTGGAAGGTGAAGATAAACCAGTAGAAAAAGCTGCTTTGATTTTGACACCGAAGGCCAGAGCAAAAGgacagggctctgtggggcACTCCCCTGTGAAGCTGACAGCCAGGTCAGAGCAGCAACACTTACAGAGCAGACTGGAGAGCATCTGGACAGCTCTTCATGTCCCGGATGGAGAAAGGCTGGACATGGCAATCAAATACAGCTCACATGCCTACAAGGAACGTCTTGGGGAGGCAACCAGTGCATGGGAAAAAgctgtccagttcatccagcAGAGGGAGTCCTTGCTAGCGAAACTGGAGCAATTCGAGAGCAACGCCTCAGACCCCAATAGGTTTTTTGAACGAGGTTATCGTGGCACATCAATTGCAAGAATGGATGAATCCAAACAAAGGGAAAAACTGCATTCCCAGATATCCGCTGTTGAGAGCCCACTGGGCAAGGCTGTACATCACCTCCAGGACTGCTTTCATGACACTGTCACGTACAAAGGCCGGCCCTATGCTGAGAAGATGCGCTGGGACAGAATTGAGATGCTGTACTGGCTGCAGCAGGAGCGTCGCAGACGGGCGctggagagagtgggggagcGTGGGGGGGGCCTGCCTGGGAGACTGCCTCCCCTACATCCACCCCAACACCTGCAGCCTGGCACAGAGGCCCTGGGCCTACCATACCCACTCACACACCTCACTCCACAGTGA

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0032502 developmental process biological_process

KEGG:

id description
ko05205 Proteoglycans in cancer

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012621 True 1134 mRNA 0.51 9 8500 15409

Neighbor

gene id symbol gene type direction distance location
AMCG00012625 NA coding upstream 108630 124039 ~ 148105 (-)
AMCG00012626 NA coding upstream 137253 152662 ~ 195601 (-)
AMCG00012623 NA coding upstream 266185 281594 ~ 298125 (-)
AMCG00012624 NA coding upstream 404824 420233 ~ 450576 (-)
AMCG00012632 NA coding upstream 542420 557829 ~ 574372 (-)
G38305 NA non-coding upstream 581199 596608 ~ 596818 (-)
G38355 NA non-coding upstream 821702 837111 ~ 840487 (-)
G38472 NA non-coding upstream 1869220 1884629 ~ 1887591 (-)
G38473 NA non-coding upstream 1885351 1900760 ~ 1901924 (-)
G38475 NA non-coding upstream 1979438 1994847 ~ 1995063 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other upstream 498813 514222 ~ 539591 (-)
AMCG00012646 LOC107658747,LOC107707963 other upstream 1563546 1578955 ~ 1817200 (-)
G38458 NA other upstream 1761445 1776854 ~ 1777221 (-)
G38490 NA other upstream 2168476 2183885 ~ 2184163 (-)
AMCG00012732 NA other upstream 6036955 6052364 ~ 6063817 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000020_04177484_04184880 NA coding CI01000020 null 4177478 ~ 4184880 (-)