AMCG00012631



Basic Information


Item Value
gene id AMCG00012631
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 589227 ~ 590653 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00012631
ATGCGATGCTCTCACAGTCTGCAGAGCGGGTTGTATAGCCTGATTGCCTCTCCCTCTTGCCACAGATACTCCCCTGTGTCCAGCGAGCAGCCAGATATGAGAGAGAGCTGGCTTCTGCCTGGCTTCTCCAAGAACTCTTTCCACAGCTTCACTGGAGCGTCACCAGAAGGGGATCTCACCACAGCTGCCAGACACATGGAAAAGAGGAAGTGTAACACAGCCACATGTGTGACACAGCGTCTGGCGGACTTTCTCATCCGCTCCAGCAACACCATCGGCACAGTGTATTCCCCCACCAATGTCGGCTCCAACACCTATGGCAAGAGAGATGTTAGTAGTGTAGAGCCATTCAAATACCTACAGCTTTAA

Function


GO: NA

KEGG:

id description
K08039 IAPP; islet amyloid polypeptide

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00012631 True 369 mRNA 0.53 2 589227 590653

Neighbor


gene id symbol gene type direction distance location
AMCG00012632 NA coding downstream 14855 557829 ~ 574372 (-)
AMCG00012624 NA coding downstream 138651 420233 ~ 450576 (-)
AMCG00012623 NA coding downstream 291102 281594 ~ 298125 (-)
AMCG00012626 NA coding downstream 393626 152662 ~ 195601 (-)
AMCG00012625 NA coding downstream 441122 124039 ~ 148105 (-)
AMCG00012630 NA coding upstream 9202 599855 ~ 613207 (-)
AMCG00012634 LOC108427023,LOC106609119,LOC105893998,LOC102196680 coding upstream 154682 745335 ~ 751549 (-)
AMCG00012637 NA coding upstream 176352 767005 ~ 792382 (-)
AMCG00012638 NA coding upstream 209406 800059 ~ 816537 (-)
AMCG00012636 NA coding upstream 275478 866131 ~ 893617 (-)
G38305 NA non-coding upstream 5955 596608 ~ 596818 (-)
G38355 NA non-coding upstream 246458 837111 ~ 840487 (-)
G38472 NA non-coding upstream 1293976 1884629 ~ 1887591 (-)
G38473 NA non-coding upstream 1310107 1900760 ~ 1901924 (-)
G38475 NA non-coding upstream 1404194 1994847 ~ 1995063 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 49636 514222 ~ 539591 (-)
AMCG00012646 LOC107658747,LOC107707963 other upstream 988302 1578955 ~ 1817200 (-)
G38458 NA other upstream 1186201 1776854 ~ 1777221 (-)
G38490 NA other upstream 1593232 2183885 ~ 2184163 (-)
AMCG00012732 NA other upstream 5461711 6052364 ~ 6063817 (-)
G39487 NA other upstream 5865068 6455721 ~ 6456178 (-)

Expression



Co-expression Network