AMCG00012637


Basic Information

Item Value
gene id AMCG00012637
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 767005 ~ 792382 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012637
GATGTACTATTAAGTTACCGATTAGGGTCTTatcgttttctttttaagataaTCTAGACAATGACTAACGTCGCTCTTACAAAAACGAAATACCTGCATCAACTAGGGAGACCAGTGTACGGACCACAGGGACTGATTGCAAGTTATCCTCATGGGGGTCGAAAACAACAAGATGTCGGAAGAAAAGGCAGTAAAAGGGCAGTGCTGCTCCAAACTTAAGCTTTTCCTAGTATCCCTGTCTGTTGTCTACTTTGCCAAAGCACTGCAGGGAAGTTACATGAAGAGTTCAATCACCCAAATAGAGAGGTGCTTTGACATCCCCAGCTCTTTGATAGGAGTCATTGATGGGAGCTTTGAAATGGGTAATCTCTTGGTCATTGCCTTTGTCAGCCACTTTGGGGCAAAGCTTCACAGGCCCAGGTTGATAGGCATTGGCTGCCTGCTGATGTCTTTGAGCTCCTTCCTCACTGCCCTGCCTCATTTGTTCATGGGACAGTATCAGTATGAAACCTCCATAGCACATTCGTCCAACATAACTGCAAGTATTTCTCCCTGTCTCGCCAAACATTCTGAGGACCTGAGCAGTACCAGTGCACCAGCTGGCCCTAGACCAGACTGTGTTCAAGAAACTGGATCCTCCATGTGGGTGTATGTCTTCCTGGGAAACATGCTGCGTGGAATTGGAGAAACCCCTGTGATACCCTTGGGTGTATCCTACATTGATGACTTTGccagagaagaaaacacagcTTTTTACCTGTCTTGCATCCAGACAATTGGTATAATGGGCCCAATATTTGGGTTTCTCTTGGGGTCCCTATGTGCCAAGCTGTATGTGGATTTCGACTCTGTTAATTTAGATACCTTGACAATCAACTCCAAGGATGCACGATGGGTGGGCGCTTGGTGGCTGGGGTTCCTGGTATCTGGGGTGGTGATGCTCGTGGCTGGCATCCCTTTCTGGTTCTTGCCCAGGTCTATTCCCAAGCAAGGGAAGGCCAAGGGCAAAGATGAGCATTCCCAGGAACTGGTCAAGTTCATAGGGGAGGAAAAAAGTTATCAGAGTGCCAAAAATCCACAGACTGGcaaaatatttgacttagcAAAAGATTTTCTTCCTTCATTGAAAAAACTCTTCCACAATTCTGTGTTTTCCCTGATAATGTGTGTTTCCGTTATACAAGTCAATGCGTTTATGGGAATTATCACATTTATGCCAAAGTTCATGGAACAAATATATGGCCAGTCTGCCTCCAAGGCCACCTTCCTCATAGgTGTCCTGAATTTGCCTGCTGTTGCAGCTGGAATTTTCACTGGAGGTTTAATCCTGAAGAAATGCAAACTGAGTGTTATTGGGATTGCTAGGTTAGCAATTGGAGCCTCATTCACCTCTTTCCTGCTAATGCTTGTCTACTATGCACTGAACTGTGAGAACACACAAGTGGCTGGATTGACCATTTCATATGAAGGagtGAAACAAGTGTCATACCAGCAGCAGAGTCTGTTGTCTAAATGCAATACTGGGTGCTCCTGCTCTCTGAAGCACTGGGACCCTGTCTGTGCCCACAGTGGTGTAACATTCGTCTCTTCCTGCCTTGCTGGCTGCAGAACCTCCACTGGAACTGGGAAACAAATGGTGTTTTACAACTGCAGCTGCCTGGAGGCCGGGAACAGTTCGGCTATCCTGGGACAGTGTCCACGACCGGAGGACTGCGACACCATGTTCAAGTATTACATGTTCATCTCAGTTGTTGCAGCCTATTTGTCTGCCTGTGGAGCCACTCCTATGTACATCATCCTGCTCAGGTCTATTAAGACAGAACTAAAGTCTCTGGCTCTGGGAATCCAGACTTTGTTTGTAAGGACTCTGGGTGGAATCCCCGCCCCCATCTATTTTGGAGCACTGATTGACAGGACATGCTTGAAATGGTCCTCAAAAGCTTGTGGGAGCCATGGTGCCTGCAGACTGTATGATTCAGATGCATTCAGAAAGGATCAAAAACAGGCTCTGCAGAAACAGGCTGAGGGGAACAGCTACACACATGGACAGGAGGACcagacaaatggaaaaaaatcctCTGTAGCTTTTCTGAAGAACGAGGAGGTGGTGGAAAGGGAGTTGAGCATATAG

Function

GO: NA

KEGG:

id description
K08747 SLCO1C; solute carrier organic anion transporter family, member 1C

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012637 True 2131 mRNA 0.47 15 767005 792382

Neighbor

gene id symbol gene type direction distance location
AMCG00012634 LOC108427023,LOC106609119,LOC105893998,LOC102196680 coding downstream 15456 745335 ~ 751549 (-)
AMCG00012630 NA coding downstream 153798 599855 ~ 613207 (-)
AMCG00012631 NA coding downstream 176352 589227 ~ 590653 (-)
AMCG00012632 NA coding downstream 192633 557829 ~ 574372 (-)
AMCG00012624 NA coding downstream 316429 420233 ~ 450576 (-)
AMCG00012638 NA coding upstream 7677 800059 ~ 816537 (-)
AMCG00012636 NA coding upstream 73749 866131 ~ 893617 (-)
AMCG00012635 pde3a coding upstream 122053 914435 ~ 920125 (-)
AMCG00012640 NA coding upstream 221100 1013482 ~ 1037353 (-)
AMCG00012643 aebp2,LOC103380429,LOC101074123,LOC106609187 coding upstream 246387 1038769 ~ 1345918 (-)
G38305 NA non-coding downstream 170187 596608 ~ 596818 (-)
G38355 NA non-coding upstream 44729 837111 ~ 840487 (-)
G38472 NA non-coding upstream 1092247 1884629 ~ 1887591 (-)
G38473 NA non-coding upstream 1108378 1900760 ~ 1901924 (-)
G38475 NA non-coding upstream 1202465 1994847 ~ 1995063 (-)
G38478 NA non-coding upstream 1239455 2031837 ~ 2032211 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 227414 514222 ~ 539591 (-)
AMCG00012646 LOC107658747,LOC107707963 other upstream 786573 1578955 ~ 1817200 (-)
G38458 NA other upstream 984472 1776854 ~ 1777221 (-)
G38490 NA other upstream 1391503 2183885 ~ 2184163 (-)
AMCG00012732 NA other upstream 5259982 6052364 ~ 6063817 (-)
G39487 NA other upstream 5663339 6455721 ~ 6456178 (-)

Expression


Co-expression Network