AMCG00012640



Basic Information


Item Value
gene id AMCG00012640
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 1013482 ~ 1037353 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00012640
atgGCGATGACGCTCGAGTCATCAGATCATTTCAGGGGTAAATCCAGCTGCAGTTACGAACAGAAATGCCCGGGGCCAGTGGAGCGCAATGGCTATGTGCAGACGTGTGTTGCCCCTCTGTTTCCGGACTCGGACTGGGGGTCGTGGGTGAGACTGCTGCTGATTAAGATCTGGAGGTCTAGAGGACTGTCGTCTGCGGTGTGTGTGGGGTCGCTTTCGGTTTTTCTCACTCTGGTGGTTAAATTTGCAAACGGCGAGATTGAGTacagcagtagtagcagcagcagcagcagtggcacCACGCTGATCGGGACCTCTACCAATTCCTTCTCGGTGCGCGCAGGAGAGCTCTTGCTTTCTTGGTGGCAGTTGATTTCTCCTCTCTTCACCTTACTATGTGCCTTCTTCTGGGTCGGCTTGTATGTAATCCGCTGTGGAGTCCTTTGCCAAACTGCCCTTTTCCTCCTGACAGTCTGCCACTTGGGCGAAGCGGCTGCCCAGAGTCTCCTGCGCGGCGGTGTCGAAGCGGATGAGCAGCTCCTGTCCTTCACCGCGACCGTGGTGGTCCTCGCCTGCCTGGCCAGCGGGGCACTCATGGTGGTAAGACTGAAACAGGGGGTGTCGCTCATCGTCTGTGTCAGCTTGGTCAGGACCATCTCCCTCCTTTCACTGAACAAGGTGCGGGCGAGCTGGAGACCCTATCTGGCGTACCTGGTCGGAGTGCTGGGCATCCTGCTGGCGAGGTATGCGGACAGGCTGCTGCCGAGCGAAGGGAGACGCAGAGAGGGCTGGACCTCCGTGACTGCGGCGAAGGAAGAGATCCCGGTATTTAAAAGGAGAAGGAGGTCCAGCTCTGTTATATCCTCAGACATGGCACACAGTcagcccagcagcagcagcaagtcACGCAGGAGGACTTCGCTTCCATGCATTCAAAGGGACCAGgaAAGGTTCACTAAACCCCTCAGGTGA

Function


GO:

id name namespace
GO:0008081 phosphoric diester hydrolase activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00012640 True 972 mRNA 0.57 2 1013482 1037353

Neighbor


gene id symbol gene type direction distance location
AMCG00012635 pde3a coding downstream 93357 914435 ~ 920125 (-)
AMCG00012636 NA coding downstream 119865 866131 ~ 893617 (-)
AMCG00012638 NA coding downstream 196945 800059 ~ 816537 (-)
AMCG00012637 NA coding downstream 221100 767005 ~ 792382 (-)
AMCG00012634 LOC108427023,LOC106609119,LOC105893998,LOC102196680 coding downstream 261933 745335 ~ 751549 (-)
AMCG00012643 aebp2,LOC103380429,LOC101074123,LOC106609187 coding upstream 1416 1038769 ~ 1345918 (-)
AMCG00012642 NA coding upstream 322970 1360323 ~ 1582270 (-)
AMCG00012649 NA coding upstream 1278649 2316002 ~ 2317119 (-)
AMCG00012648 NA coding upstream 1282174 2319527 ~ 2345217 (-)
AMCG00012655 slc25a3,LOC102778869,LOC105895663 coding upstream 1384255 2421608 ~ 2431840 (-)
G38355 NA non-coding downstream 172995 837111 ~ 840487 (-)
G38305 NA non-coding downstream 416664 596608 ~ 596818 (-)
G38472 NA non-coding upstream 847276 1884629 ~ 1887591 (-)
G38473 NA non-coding upstream 863407 1900760 ~ 1901924 (-)
G38475 NA non-coding upstream 957494 1994847 ~ 1995063 (-)
G38478 NA non-coding upstream 994484 2031837 ~ 2032211 (-)
G38501 NA non-coding upstream 1257607 2294960 ~ 2295164 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 473891 514222 ~ 539591 (-)
AMCG00012646 LOC107658747,LOC107707963 other upstream 541602 1578955 ~ 1817200 (-)
G38458 NA other upstream 739501 1776854 ~ 1777221 (-)
G38490 NA other upstream 1146532 2183885 ~ 2184163 (-)
AMCG00012732 NA other upstream 5015011 6052364 ~ 6063817 (-)
G39487 NA other upstream 5418368 6455721 ~ 6456178 (-)

Expression



Co-expression Network