AMCG00012654


Basic Information

Item Value
gene id AMCG00012654
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 2359186 ~ 2360925 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012654
ATGCAGATTGCCAAGATGCAACAGGAGCTGAAAGAGCTGGAGCCACTTCTTGTGCAGCGCAGTGCCGAGACAGAGGAGCTGCTGGGGGTCATCACCACAGAGACGCAGGAGGTAGAGGCAGTGAAGAGGGAGGTGGAGGCAGACGAAGCTATGGCCAACAATGCAGCACTGGAGGCTCAGAGCATCAAGGAGGAGTGTGAGCAGAGGTTGAGTGTGGCCCTGCCTGCTCTGGAGGCAGCTGTATCAGCGCTGGACACGCTGAAGGCCAGTGACATCACACTGGTCAAGACTATGCAGAGTCCACCCGCTGGTGTCCGTAGCACACTGGCTGCCATCTGCATCCAGAAGTGCATCAACTCTAACCACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012654 True 369 mRNA 0.57 3 2359186 2360925

Neighbor

gene id symbol gene type direction distance location
AMCG00012653 NA coding upstream 39 2333875 ~ 2359147 (+)
AMCG00012650 NA coding upstream 63938 2265573 ~ 2295248 (+)
AMCG00012647 NA coding upstream 457513 1900768 ~ 1901673 (+)
AMCG00012644 NA coding upstream 551570 1778607 ~ 1807616 (+)
AMCG00012645 plcz1 coding upstream 589483 1761257 ~ 1769703 (+)
AMCG00012652 NA coding downstream 413 2361338 ~ 2391704 (+)
AMCG00012651 NA coding downstream 36564 2397489 ~ 2404357 (+)
AMCG00012657 LOC107725508 coding downstream 139133 2500058 ~ 2540181 (+)
AMCG00012658 NA coding downstream 451073 2811998 ~ 2851213 (+)
AMCG00012659 guca1a coding downstream 816473 3177398 ~ 3181902 (+)
G38503 NA non-coding upstream 62007 2296692 ~ 2297179 (+)
G38489 NA non-coding upstream 175048 2183891 ~ 2184138 (+)
G38484 NA non-coding upstream 258796 2100124 ~ 2100390 (+)
G38474 NA non-coding upstream 364101 1994844 ~ 1995085 (+)
G38457 NA non-coding upstream 581936 1776848 ~ 1777250 (+)
G38505 NA non-coding downstream 53596 2414521 ~ 2431408 (+)
G38526 NA non-coding downstream 77172 2438097 ~ 2440033 (+)
G38530 NA non-coding downstream 88858 2449783 ~ 2468853 (+)
G38531 LOC103376870 non-coding downstream 95832 2456757 ~ 2532789 (+)
G38551 NA non-coding downstream 255997 2616922 ~ 2617197 (+)
AMCG00012641 NA other upstream 777798 1394839 ~ 1581388 (+)
AMCG00012639 LOC105896728,LOC103361979,LOC104943185,LOC102310764,LOC102198406,LOC100699467,LOC101465237 other upstream 1519920 778908 ~ 839266 (+)
AMCG00012681 NA other downstream 1822950 4183875 ~ 4251594 (+)
G38954 NA other downstream 2009388 4370313 ~ 4373574 (+)
G39297 NA other downstream 3191492 5552417 ~ 5552767 (+)
AMCG00012718 NA other downstream 3446921 5807846 ~ 5823515 (+)
AMCG00012734 NA other downstream 3692223 6053148 ~ 6056832 (+)

Expression


Co-expression Network