AMCG00012672


Basic Information

Item Value
gene id AMCG00012672
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 3727446 ~ 3729646 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012672
ATGCTCTTCCCTGTGGTGGTGTGTGTTTTGCTGGGCTCTGGGCTCGGGTTTGACCTGGGCCAGTCAACCCGCTGTGTGGCCATCCCCCCTCAGCTGGCAGTGTGCCAGGACGTGGGCTACAGTGAGATGCGTCTTCCCAACTACCTGGGGCATCGCAGCCTGCAGGGTGAGGTGGTGCCACGCTCTGAGGACTGGCGTCCCCTGCTGCAGACTGGCTATAGGAGgttctctttatctctctctctctctgtgttttgttgcaGGTTTATCCAGCCATGTCACAGCCTGTGTTTGGCAGTGAGGGACAGCTGTGCACCAGTGCTGGCGTGTTGGGGTCAGCTATGGCCTGACGCACTGGACTGTGATCGCTTTCCAGACCATGAGGAAATGTGTCTCACCCCTGCATCCAAACAGGTCGAGCACATAATTAAAGGTAATTCCCCCCTACCCTGTCCCACCCTTCCCAGTATCCAGGACATTAGGGAGCTATCAACATACCAAGCTTTACTGATCAGTCTCACTCCTGGATCTTCAATCCCCTCTCTTATGGCAAGCCACCTAACAAAAATTTTTCCCCAGCCAGGATGCCAGGACTGCCCTGCCATGGAGGAGCATTCCTCCCACAAGACTGTGCTGGATGCACTCTGCCAAAATGACTTTGCAGTGAAGGTGCTAGTGTCCCAGCGGCGGTTGGAGCCCGAGTTCACTGTGGAGGGGCGAGTGGAGTTTGTGCATCAGGGGCCCCTGCTGCCCTTCAACACACACAGTCTGCTGCAGCAGTGGCTCCTCCTCCACCCGCACTGCGCCCCTGGCCTGGCACGCCCCAGCCGTACGCAGCTTCACCTACTGGTTGGGGTGGTACAGCCCGATGGCATGCTGGTACTCAGCCGCGTCTTCCCCTGGCACAAGAGGGACGCAGAGCTCACCACCGCTGTGCGAAAGTGGAAACACCACAAATGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012672 True 963 mRNA 0.58 4 3727446 3729646

Neighbor

gene id symbol gene type direction distance location
AMCG00012674 mapk11,LOC108442323,LOC105020226,LOC103035641,LOC106609456,LOC107725929,LOC100700904,LOC108279456 coding downstream 6046 3678679 ~ 3721400 (-)
AMCG00012670 NA coding downstream 64233 3652207 ~ 3663213 (-)
AMCG00012668 NA coding downstream 306418 3349631 ~ 3421028 (-)
AMCG00012666 NA coding downstream 455163 3203154 ~ 3272283 (-)
AMCG00012662 NA coding downstream 556645 3121200 ~ 3170801 (-)
AMCG00012671 NA coding upstream 9098 3738744 ~ 3754995 (-)
AMCG00012673 LOC106910051 coding upstream 27449 3757095 ~ 3772987 (-)
AMCG00012676 srpk2,LOC107552422 coding upstream 132402 3862048 ~ 3863424 (-)
AMCG00012677 usf2,LOC101066260 coding upstream 251144 3980790 ~ 3990090 (-)
AMCG00012678 usf2,LOC105007924 coding upstream 285526 4015172 ~ 4024403 (-)
G38791 NA non-coding downstream 88580 3554385 ~ 3638866 (-)
G38792 NA non-coding downstream 165596 3506837 ~ 3561850 (-)
G38743 NA non-coding downstream 296110 3429936 ~ 3431336 (-)
G38740 reln non-coding downstream 379799 3311332 ~ 3347647 (-)
G38650 NA non-coding downstream 805784 2916028 ~ 2921662 (-)
G38841 NA non-coding upstream 53514 3783160 ~ 3783391 (-)
G38842 NA non-coding upstream 54158 3783804 ~ 3784050 (-)
G38909 NA non-coding upstream 244707 3974353 ~ 3976596 (-)
G38910 NA non-coding upstream 307793 4037439 ~ 4096741 (-)
G38965 NA non-coding upstream 397361 4127007 ~ 4517632 (-)
G38490 NA other downstream 1543283 2183885 ~ 2184163 (-)
AMCG00012646 LOC107658747,LOC107707963 other downstream 1910246 1578955 ~ 1817200 (-)
G38458 NA other downstream 1950225 1776854 ~ 1777221 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 3187855 514222 ~ 539591 (-)
AMCG00012732 NA other upstream 2322718 6052364 ~ 6063817 (-)
G39487 NA other upstream 2726075 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 2908834 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 4161843 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 5382795 9112441 ~ 9152405 (-)

Expression


Co-expression Network