AMCG00012682


Basic Information

Item Value
gene id AMCG00012682
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 4303995 ~ 4308720 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012682
ATGCCACTCAACGATAAGCGCCCCTCCACATCCTCCAGTGAGGAACAGAGCAGTGACACGGAGTCGTCGGAGAGATCGGACAGCATGACTTCCGCCAGTGACTCTGACTACTCCCGGCAGAGTTTCAACAGCGACTATTCAAGCAAGCACAGCTCCCCAGCTTcaAGCCCTCCAAAAATGATAACATTTGATGAACTTATGGCATCTGCCAGAGACCTGTCTAACTTGAGTCTGGCCCATGAAATAATAGTGAATGGACAATTCCAAGTGGAACAGCCAGACCTACCTCAGAACAGTCTAGAAAGAAGAGTGAAAGAGATTGTTCACAAGGTATTCTGGGATCGATTGGAGGCCGAGCTGAATGAAGACCCCCCTGAATACAAGCATGCGATCAAACTTCTGGAAGAGATTAAAGAGATCCTGGTGTCTTTCCTAAGTCCTGGTGCCAACCGTCTCCGCACCTTAATTTGTGAGGTCCTGGACATGGATCTGATACGCCAGCAGGCAGACAAGGATGCCATGGATATCCACGGACTGGCCAATTACATCATCAATGTCATGGGCAAGCTGTGTGCCCCTGTGCGAGATGAAGAagtaaaaaagttaaaagaaaatcctGGCAACATTGTATCAATGTTTAAAGTCCTGGACCTGATGAAAATGGATATGGTTAATTACACCATTCAGAGCCTTCGACCCCAGCTTCAGCGCCACTCCGTTGAGTACGAAAGAGCCAAGTTCCAGAGCATATTGGAAAAAACTCCTAGTGCACTGGACCACACCACAGAATGGATTAAGGAGTCGTTGGAGGAGCTAATGCCTTCACAGTCCTGCACTAATGACGCCTCTGGACCTGCAAAGAATATGAAGGCCCTCCCAAGCCCGATACTTGTGTTGAATACAGGTTACCTTAAACTATTGAACTGGGACTATGAGAAGAAAATCTTACCAGAGACTCTGATGACAGATGAGATTCGCCTGCGAGAGATGAAGCAGAGGTTGGACCTACTCAAATCTGTAGCCTCTGTGTTGCTTATTGTCTACAATGCAATAGGCGGGCCCATCTGTGGCCTGCCAGTACTGGCCGAGAAACTGAAAAAGGTGACCAGTGTTCTCCTGGAAGGCATGCACAGCAAAACATTTAACAAGATGGAGGCTCTTGACAATGTCACAACCCAGATTTGTTCTGAGCTGAACAAGTCTTTAACTGAGCGCAACTATCCCGCTCTGCCTGGAGATGTCCAGGTTGCTCTGAAGGGACAGATCTGCAGTATTACTGAGGAAAACAATCCCATTACCACATTGATTGAAGGAAGAACTCTGCTTTACTTCAGAAGCTTCCTCTGTATCCCCAATGCTCACGTCCACCCACCTGCTATCCCGGGAGGTCTGGCTTTCATTAAGGCAGAGCTGGAAGTACTTGGAGTTCTCTATGTCAATATTGTCAACTTCAATAAGCAAGTCTATAGCCCCTTTTATGCGGGGGTCCTGCGGAAACTGCTCTTCAATGAAGCCTCAGAGACACCTGGTGAAATGCCAGCACCTCCAGTGGTTACTGAGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012682 True 1563 mRNA 0.48 9 4303995 4308720

Neighbor

gene id symbol gene type direction distance location
AMCG00012678 usf2,LOC105007924 coding downstream 279592 4015172 ~ 4024403 (-)
AMCG00012677 usf2,LOC101066260 coding downstream 313905 3980790 ~ 3990090 (-)
AMCG00012676 srpk2,LOC107552422 coding downstream 440571 3862048 ~ 3863424 (-)
AMCG00012673 LOC106910051 coding downstream 531008 3757095 ~ 3772987 (-)
AMCG00012671 NA coding downstream 549000 3738744 ~ 3754995 (-)
AMCG00012683 NA coding upstream 40387 4349107 ~ 4367364 (-)
AMCG00012684 NA coding upstream 71153 4379873 ~ 4381284 (-)
AMCG00012688 ascl1a,ascl1,LOC107590149,LOC107664850,LOC107596391,LOC107744950 coding upstream 198907 4507627 ~ 4508220 (-)
AMCG00012690 NA coding upstream 315195 4623915 ~ 4642672 (-)
AMCG00012691 NA coding upstream 376196 4684916 ~ 4696006 (-)
G38910 NA non-coding downstream 207254 4037439 ~ 4096741 (-)
G38909 NA non-coding downstream 327399 3974353 ~ 3976596 (-)
G38842 NA non-coding downstream 519945 3783804 ~ 3784050 (-)
G38841 NA non-coding downstream 520604 3783160 ~ 3783391 (-)
G38791 NA non-coding downstream 665129 3554385 ~ 3638866 (-)
G39017 NA non-coding upstream 18363 4327083 ~ 4329635 (-)
G39160 NA non-coding upstream 476974 4785694 ~ 4786528 (-)
G39174 NA non-coding upstream 605283 4914003 ~ 4916594 (-)
G39175 LOC106613431,LOC106584099,LOC106573797,LOC106609167 non-coding upstream 621068 4929788 ~ 4930753 (-)
G39189 NA non-coding upstream 622524 4931244 ~ 5006607 (-)
G38490 NA other downstream 2119832 2183885 ~ 2184163 (-)
AMCG00012646 LOC107658747,LOC107707963 other downstream 2486795 1578955 ~ 1817200 (-)
G38458 NA other downstream 2526774 1776854 ~ 1777221 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 3764404 514222 ~ 539591 (-)
AMCG00012732 NA other upstream 1743644 6052364 ~ 6063817 (-)
G39487 NA other upstream 2147001 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 2329760 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 3582769 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 4803721 9112441 ~ 9152405 (-)

Expression


Co-expression Network