AMCG00012704


Basic Information

Item Value
gene id AMCG00012704
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 4996564 ~ 5005697 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012704
ATAAGTTCATCTATTAATGGGGCTGAAAAACCTTTACGAAACCACGACAGACGAAGTGTGCCGAGCCATCTCCCTGCAGAACATCTGTCTGTGGCCCAGCACTCCTCCCTACCTCCGGTCAGGAAGTCAGTAAACATGGAAGAGTCCTCCTCCGGGTCCCCCGACTCTGCAGCAACTGATGGGAAAACACATCACCCAGCCATTAAGGATGTCAATATTTTCTTTGACGAGTCTGAGGGGGTGAACAGCCCCTCCAAGGACGACGATTCACTGCTTCACCCTGGAACACTGACCAGCAATTCTGAGGATGTGAGTCACCTGGAAGCGACTGGAGAAGGAGTCAAAGAAAAGAGTAAATCGAGTGGCCTGTTCTTCAGGGATGGGAAGTGCCGCATTGATTACATCCTCGTTTACAGAAAGTCCAGTCCACAAATAGAAAAGCGAGAGGTCTTTGAGCGCAATATCAGAGCAGAAGGCCTGCAAATGGAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012704 True 492 mRNA 0.50 3 4996564 5005697

Neighbor

gene id symbol gene type direction distance location
AMCG00012705 LOC106609519,LOC106576405 coding downstream 17193 4934509 ~ 4979371 (-)
AMCG00012694 utp20,LOC107576235 coding downstream 105666 4864869 ~ 4890898 (-)
AMCG00012692 NA coding downstream 149768 4840227 ~ 4846796 (-)
AMCG00012693 mybpc1 coding downstream 168788 4787534 ~ 4827776 (-)
AMCG00012689 LOC107744925,LOC107664854,LOC107588513,LOC107590206,LOC107695881,LOC107725616 coding downstream 223606 4760685 ~ 4772958 (-)
AMCG00012709 gas2l3 coding upstream 67188 5072885 ~ 5094228 (-)
AMCG00012708 NA coding upstream 91624 5097321 ~ 5122506 (-)
AMCG00012707 slc17a8,LOC107553956,LOC107686235,LOC107672209 coding upstream 147578 5153275 ~ 5171222 (-)
AMCG00012710 NA coding upstream 185256 5190953 ~ 5203165 (-)
AMCG00012711 NA coding upstream 282331 5288028 ~ 5303893 (-)
G39175 LOC106613431,LOC106584099,LOC106573797,LOC106609167 non-coding downstream 65811 4929788 ~ 4930753 (-)
G39174 NA non-coding downstream 79970 4914003 ~ 4916594 (-)
G39160 NA non-coding downstream 210036 4785694 ~ 4786528 (-)
G38965 NA non-coding downstream 478932 4127007 ~ 4517632 (-)
G39231 med21,LOC102798687 non-coding upstream 200907 5206604 ~ 5209859 (-)
G39245 NA non-coding upstream 215074 5220771 ~ 5282686 (-)
G39246 LOC100846954 non-coding upstream 228465 5234162 ~ 5250471 (-)
G39281 NA non-coding upstream 382496 5388193 ~ 5408760 (-)
G39295 NA non-coding upstream 540137 5545834 ~ 5546069 (-)
G38490 NA other downstream 2812401 2183885 ~ 2184163 (-)
AMCG00012646 LOC107658747,LOC107707963 other downstream 3179364 1578955 ~ 1817200 (-)
G38458 NA other downstream 3219343 1776854 ~ 1777221 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 4456973 514222 ~ 539591 (-)
AMCG00012732 NA other upstream 1046667 6052364 ~ 6063817 (-)
G39487 NA other upstream 1450024 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 1632783 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 2885792 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 4106744 9112441 ~ 9152405 (-)

Expression


Co-expression Network