AMCG00012710


Basic Information

Item Value
gene id AMCG00012710
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 5190953 ~ 5203165 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012710
ATGCGCTCTCTCATCGCCCTGCAAGGAGCCGCGGCGCAAGAAGTCCCGAGCCATATTGAGTTTTCCTTCGGGAAGTTCCGGAATGTGAGTTTGCCGAAAAATGTGACGGTGGAGGCGGTCGTCTCCAAAATTCCAGCAGACATCACCTACATCGTCTTTCAGTTTCACACCCAGCACCAAAATGCAACTCTGTCTTATGACCGGATCCCGACTGTAAGCTCTTCTCAGACTGGCTTTGATGTTGGCCTGCTGTCTCCACTCCGCCTGCTGCAGAGGTCCCTACAGTGGTATTTGCTGTCTCCTGAGGGCAGCCCTGTAGCAGGCACTGCTGTCATCCTCCCCTACCGACAGAGCGACCCAGTTCCTGGAGGTTGTAATCTGGAGTTTAACCTCAGCATCGATGCCAGCATCTACCTCCATTACAATCTTTTCGAGACCATCATTCGGTTTGCACCTGCGAATATTGGATATGCAAGGGGAAGCTCTCCTCCGCTATGTGATGTGAACATGGGGCAAAACTCTCGCTGGCGTCTCCAGTACGATGTTTACCAGTACTTCCTGCCAGAAAACAACCTATCTGAAGAACTCCTGATCACCCACATTCAAAAGGTGGCCAACGTTCAGGAGATGACTGCCAACGGCAGAAGATTGGTGACGTTAACCTCAAATGACAAAACCATGGTGTCCTTCAGCTCTATTCCGGGCCAAGGAGTCATCTACTCGGTCATAGTGAGGGACCCCCTTTTAAACACCTCAGCCTCCTACGTGCCTGTTCACACCTACGGCTGCAGTTTTACCTCCATGCTGGACAACTGCTACACTCTGGGAAAGGTGTCTACAAAGGTCTTATTTACCATGCTTGGTATAGCTGGccttttaatttgcttttttggACACAGGTTCTTCAAATCtgAACTGTTCTGTGTGGGGTTTGCCTTTGTGGCTTTCCTGTTTTTCATTCTGATTACAAGAACATCATCCCTGGATTATGACTTGCGTCTGGCCCTGGCGACAGTCATGGGTGTAGTGGGCGGGGTGCTGCTGGTCCTGTGTTGGTGGAGGTCTGGTTCTGTGCTCCTGTGCGTCATAGTGGTCGGAATGATCTTAGGATTTCTGGTGTCCTCCACCTTCTTCTTCACACCCATAGGCAACTTCCAGATTTTCCGCTCCGACGCTGTGTTCTGGGTGACCTTCAGCAGCATTGTCATGTTGTTCCCTTTAATATTCCTCCGGTGGCCCAGAGAGGGGAACATAACAGCCTGTGCAATTGTAGGTGGGTACGCTGTGGTTTTAGCTGTCAATAGCTACATCTATACAAGCCTTTCCTACATCGTGCTAGACATCCTGAAGAGAGCCTTAAACAATGACTTCAGCAGAGCTTTCACAGATGTACCCTTTCAAGCAATAGATTTCATCATGATCACAGTGTGGGTGGTGCTGGCGGTGAGTGGCATGGTGCTGCAGCTGTACAGAGAGAGGAGCAGGCCGTTCTTTCCCCCCAGCCCCTATGTCATGTGGAAACAAGAACGAGAAAGACGCAAGACCAATATCCTGGACCCCAGCTACCATGTCCCGTCACTGTGGAGCCGCTTAAAGAGCCGATTGCGAGATGCTTTTCAGAGGAGAGAACCTGCCGGGGAGAGAACGCCTCTGCTGTTACACTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012710 True 1665 mRNA 0.51 13 5190953 5203165

Neighbor

gene id symbol gene type direction distance location
AMCG00012707 slc17a8,LOC107553956,LOC107686235,LOC107672209 coding downstream 19731 5153275 ~ 5171222 (-)
AMCG00012708 NA coding downstream 68447 5097321 ~ 5122506 (-)
AMCG00012709 gas2l3 coding downstream 96725 5072885 ~ 5094228 (-)
AMCG00012704 NA coding downstream 185256 4996564 ~ 5005697 (-)
AMCG00012705 LOC106609519,LOC106576405 coding downstream 211582 4934509 ~ 4979371 (-)
AMCG00012711 NA coding upstream 84863 5288028 ~ 5303893 (-)
AMCG00012712 syt10,LOC106609485 coding upstream 209041 5412206 ~ 5414340 (-)
AMCG00012713 syt10 coding upstream 221536 5424701 ~ 5436981 (-)
AMCG00012714 LOC105020308,LOC104958207,LOC100694258,LOC106609412 coding upstream 431300 5634465 ~ 5639532 (-)
AMCG00012716 NA coding upstream 588873 5792038 ~ 5805393 (-)
G39189 NA non-coding downstream 184346 4931244 ~ 5006607 (-)
G39175 LOC106613431,LOC106584099,LOC106573797,LOC106609167 non-coding downstream 260200 4929788 ~ 4930753 (-)
G39174 NA non-coding downstream 274359 4914003 ~ 4916594 (-)
G39160 NA non-coding downstream 404425 4785694 ~ 4786528 (-)
G39017 NA non-coding downstream 861318 4327083 ~ 4329635 (-)
G39231 med21,LOC102798687 non-coding upstream 3439 5206604 ~ 5209859 (-)
G39245 NA non-coding upstream 17606 5220771 ~ 5282686 (-)
G39246 LOC100846954 non-coding upstream 30997 5234162 ~ 5250471 (-)
G39281 NA non-coding upstream 185028 5388193 ~ 5408760 (-)
G39295 NA non-coding upstream 342669 5545834 ~ 5546069 (-)
G38490 NA other downstream 3006790 2183885 ~ 2184163 (-)
AMCG00012646 LOC107658747,LOC107707963 other downstream 3373753 1578955 ~ 1817200 (-)
G38458 NA other downstream 3413732 1776854 ~ 1777221 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 4651362 514222 ~ 539591 (-)
AMCG00012732 NA other upstream 849199 6052364 ~ 6063817 (-)
G39487 NA other upstream 1252556 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 1435315 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 2688324 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 3909276 9112441 ~ 9152405 (-)

Expression


Co-expression Network