AMCG00012736


Basic Information

Item Value
gene id AMCG00012736
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 6256830 ~ 6257924 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012736
ATGGCTTTAAAAAGCATTGTGTGGCACGTGGCTCCTCTGACTTGCCTCCTGCTCCACGAGGCCCTGTGCCTGGCCCTACAGACTGATCCGGGGCTGCGACACCGTTCAGCTTTCTCCGCCGCACGGACGAGCAGCATGGTGGGTGGCCAGCACATGGCAGTGACCTTCGAGAAGCTGCTGGTCAACATCGGGGGCGACTTCAACCCGGACACGGGGAGGTTTCGCTGCCGAGTGCCCGGCGTCTACTACTTCTCCTTCACTGTGGGGAAATATCCCAAGAAGTTGCTGTCGGTCATGCTGATAAAGAACGGGCGGGAGGTGCAGGCCATTGTGTACGACGAGCACCGGCACAAGAACCGCAAAGTGCAGAGCCAGAGCATCATGCTCAGCCTGCAGCCCTCGGACACCATCTGGCTCCTGCTGCATGACAACCCCAAGTATGCCTTGTATAGCAACATAGGGCCCTACACTACCTTCACCGGCTACCTAGTCTACCCAGACCCGACCTTAATAAACAACTATGTGGGTCCCCAATCCCCTGTTCCATATCACCCAGCATGCCAATCCCAGGGGGCAGCAGATTCCAAGAACACTGTGCCATCAAGGACGTGGGCAGGGGGGCAGGAGCAGCAGCTGCCTCGCTCGGCTTTCTCAGTGGCTAGGAGTCACCCTCTCATGGGAGCGGGGGACTCGGGCAGGGAGGAGAAGAGAGCGCTTAGCTTTGACGTGGAGTACGTCAATCTCGGGCGAAACTTCAACAAGACCTCGGGCCACTTCACCTGCCGCTACCCTGGTGCCTACTTCTTCACCTTCACCGTGGGAAAACACCCTCTGAAGGCCCTATCTGTGAAGCTCATGAAGAACGCTGGTGATGTTCAGGCTATGATCTTCGACGAGGACGACTCTATGCACAGGGAGATGCAGACGCAGAGCCTGATGCTGGCTCTTCAGGAAGGCGATACGGTGTGGTTATACAGTCAGCAGCATGAGCGATTTGCCGTCTACAGCAATCAGGGCAGGTACATCACCTTCACAGGGTTCCTAGTCTACCCTGAGCTCAGCACACATGAGCATCTGACCAGGACTCAATTTTAG

Function

GO: NA

KEGG:

id description
K24237 C1QTNF4; complement C1q and tumor necrosis factor-related protein 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012736 True 1095 mRNA 0.57 1 6256830 6257924

Neighbor

gene id symbol gene type direction distance location
AMCG00012735 NA coding downstream 17411 6234676 ~ 6239419 (-)
AMCG00012731 cry1aa,LOC108426403,LOC108279922,LOC105900698,LOC103023024,LOC107757210 coding downstream 170004 6071923 ~ 6086826 (-)
AMCG00012730 NA coding downstream 259718 5990103 ~ 5997112 (-)
AMCG00012715 NA coding downstream 425316 5830618 ~ 5831514 (-)
AMCG00012716 NA coding downstream 451437 5792038 ~ 5805393 (-)
AMCG00012742 NA coding upstream 31707 6289631 ~ 6327075 (-)
AMCG00012743 NA coding upstream 104525 6362449 ~ 6378254 (-)
AMCG00012744 NA coding upstream 154807 6412731 ~ 6435631 (-)
AMCG00012745 NA coding upstream 194085 6452009 ~ 6460026 (-)
AMCG00012752 NA coding upstream 349270 6607194 ~ 6619758 (-)
G39377 NA non-coding downstream 361716 5816472 ~ 5895114 (-)
G39371 NA non-coding downstream 444794 5778290 ~ 5812036 (-)
G39295 NA non-coding downstream 710761 5545834 ~ 5546069 (-)
G39281 NA non-coding downstream 848070 5388193 ~ 5408760 (-)
G39246 LOC100846954 non-coding downstream 1006359 5234162 ~ 5250471 (-)
G39443 NA non-coding upstream 10311 6268235 ~ 6268938 (-)
G39462 NA non-coding upstream 27531 6285455 ~ 6287935 (-)
G39546 kras,LOC103038241,LOC105900436,LOC107675271,LOC107675456 non-coding upstream 515044 6772968 ~ 6847396 (-)
G39556 NA non-coding upstream 528532 6786456 ~ 6795733 (-)
G39561 NA non-coding upstream 640063 6897987 ~ 6898237 (-)
AMCG00012732 NA other downstream 193013 6052364 ~ 6063817 (-)
G38490 NA other downstream 4072667 2183885 ~ 2184163 (-)
AMCG00012646 LOC107658747,LOC107707963 other downstream 4439630 1578955 ~ 1817200 (-)
G38458 NA other downstream 4479609 1776854 ~ 1777221 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 5717239 514222 ~ 539591 (-)
G39487 NA other upstream 197797 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 380556 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 1633565 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 2854517 9112441 ~ 9152405 (-)
AMCG00012858 NA other upstream 4482430 10740354 ~ 10753698 (-)

Expression


Co-expression Network