AMCG00012743


Basic Information

Item Value
gene id AMCG00012743
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 6362449 ~ 6378254 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012743
ATGAGCTGCTCTGCTCTGAGACCAACACTTATGAAGTGCTGGGGCTCCTGGGACATGGCAGCTTTGGCTGTGGGGCTGAAATTCTTGAAGTGGGGCACCAATGAGATTTTGGCTATCAAGGTTCAGAAGAAATCCTCTGACTATGACTGGCAGGGCCAGGTTGAAGTCAGCATCCTGGACAGGCTGAAAACAGAGAACATTAACGACTACAACATTGTCCGGGCTATCGAATGGTTCCAGCACAAGGGCCACAAGTGCATGAACCTGCAAAACTTCATCAACCACAGGCCACTGACACTTGAGCTCATCTGGCCCATCCTGCAGCAGTTAGCCACTGCCTTGATGAAACTGAAGAGCTTGGGGATCATCCATGCCAACCTCAAGCTTGACAACATTGTGCTGGTGGACCAGGACAGACAGCCATACAGAGTCAAGCTGATTGACTTTGGCATGGCCCGCCACCCTTCAAAAGCAGGTAGCTCTGCCTTCTTTCAGACCAAAATCTACAGGGCTCCAAAAATTTTGCTTTGCCTGCCCTACTCAGAAGTTATTGATATGTGGTCTCTGGGCTGTATCATTGCAGATATGTTTTTGGGGGATCCTCTGTTCACTGGGGCAACAAAGCATGATTCAAACAGCCTGTGGCCCGCTCTCAACAGCGGGGTCGTCAGTAGTTGCAGTGGCAGCTCCAGGGGGAACAGGGGCATCCGGATTCTGAAAAAGGGCTGAGGATTAAGGTTTGCAGGTGTGGGGTCCCCCTTGTCTGCGTGGAACACAGCTCTGATCCGTGGGATTGTGGGCGTTTGCCAGCAGCTTGACCGGAGGGAGTCACACAGACACGTCTGCCATGCATCTCCACCGAGGAGAAAGAGGAAGTGCTCTGACACAGAGGAGTCTGGCGGTCCCAGTGCAGCCCAGCAGACCGTAGTGCCCCCAGCCTGGCAGCGTACAGGAGTAGCGGCCCACTCCCAGCAGCTTGACCAGAGGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012743 True 990 mRNA 0.54 6 6362449 6378254

Neighbor

gene id symbol gene type direction distance location
AMCG00012742 NA coding downstream 35374 6289631 ~ 6327075 (-)
AMCG00012736 NA coding downstream 104525 6256830 ~ 6257924 (-)
AMCG00012735 NA coding downstream 123030 6234676 ~ 6239419 (-)
AMCG00012731 cry1aa,LOC108426403,LOC108279922,LOC105900698,LOC103023024,LOC107757210 coding downstream 275623 6071923 ~ 6086826 (-)
AMCG00012730 NA coding downstream 365337 5990103 ~ 5997112 (-)
AMCG00012744 NA coding upstream 34477 6412731 ~ 6435631 (-)
AMCG00012745 NA coding upstream 73755 6452009 ~ 6460026 (-)
AMCG00012752 NA coding upstream 228940 6607194 ~ 6619758 (-)
AMCG00012757 strap,LOC106576022,LOC106609126,LOC105020178 coding upstream 437554 6815808 ~ 6823765 (-)
AMCG00012758 NA coding upstream 550276 6928530 ~ 6981212 (-)
G39462 NA non-coding downstream 74514 6285455 ~ 6287935 (-)
G39443 NA non-coding downstream 93511 6268235 ~ 6268938 (-)
G39377 NA non-coding downstream 467335 5816472 ~ 5895114 (-)
G39371 NA non-coding downstream 550413 5778290 ~ 5812036 (-)
G39295 NA non-coding downstream 816380 5545834 ~ 5546069 (-)
G39546 kras,LOC103038241,LOC105900436,LOC107675271,LOC107675456 non-coding upstream 394714 6772968 ~ 6847396 (-)
G39556 NA non-coding upstream 408202 6786456 ~ 6795733 (-)
G39561 NA non-coding upstream 519733 6897987 ~ 6898237 (-)
G39580 NA non-coding upstream 772363 7150617 ~ 7150823 (-)
G39662 NA non-coding upstream 1292982 7671236 ~ 7671642 (-)
AMCG00012732 NA other downstream 298632 6052364 ~ 6063817 (-)
G38490 NA other downstream 4178286 2183885 ~ 2184163 (-)
AMCG00012646 LOC107658747,LOC107707963 other downstream 4545249 1578955 ~ 1817200 (-)
G38458 NA other downstream 4585228 1776854 ~ 1777221 (-)
AMCG00012628 golt1b,LOC108428784,LOC107676462,LOC107701063 other downstream 5822858 514222 ~ 539591 (-)
G39487 NA other upstream 77467 6455721 ~ 6456178 (-)
AMCG00012751 NA other upstream 260226 6638480 ~ 6695924 (-)
AMCG00012782 NA other upstream 1513235 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 2734187 9112441 ~ 9152405 (-)
AMCG00012858 NA other upstream 4362100 10740354 ~ 10753698 (-)

Expression


Co-expression Network