AMCG00012768


Basic Information

Item Value
gene id AMCG00012768
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 7426981 ~ 7455406 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012768
CTTAGATTAGGTATTTCTGTGAAAGGGCAGTCATTTCCCGTGAGTCTTCAATTAAATCTTAAATGTATTCACGTCTTTATCCATAGGTATATATGTGCATTGCTCGGTTGTagagattttgtttgtgtttgtcatcTGTGGGCACCGTCCTGACACTTTTGTACAGCCGTTCAGTTCCACTTTTCACAGGAAGAGAGAAGCTACTGCAAAGGGAGTTCTCCTTTTCATTTGAGTGCAGTGCATACACACAGTAACTCCCTGTAAGAGACATGGAAGCGGATTTTAATGAGATCTTTGGGCAAGCTGCTTTACGGAGCAAACCATCAGAGGATCTGGAAGGCTTTCTGGGTGAAAAACGAAAAATCATTCAACCCAGCTCTCTGAAGGATCCCAAGCTTGAGGAGTTGAAAACGGTTCTGATTGACTGGATCAATGACACTCTGAAGAAGGAGCACATTGTAGTGCAGAGTCTGGAGGAAGACATCTACGATGGGCTTGTCCTGCATCACCTGCTGGCCAGGTTGGCGGAGCAGAAGCTGGAGGTAGATGAAATTGCTCTGACAGCTGTGGCTCAGACCCGTAAGCTGGGGATCATACTGGAGGCCCTGCACAAGAGTCTGGGGTTGCCAGAGGAGGCCGTGCAGAAATGGAATGTTGCCCTGATCCACAACCGGGACCTGCTGGCCACCTTGCATCTACTGGTTGCCATGGTGAAGAAGTTCCAGCCAGAGAAGCAGTTGCCCCAAAATGTGTCCCTGGAAGTTGTGATCGTGGAGGTGAGCAAAAGTGGAATTAAATCTGAGAAATATACAGAGAACATCACTGAATCAAGtaATTCCTCGGATGGGAACTCTAAAACAGAAGATGCCATTGATGAGCTGCTGAAGCTGGACCCACAGAAAGTCATCACAGTGAAACAGgcaATTTTACACTTTGTGAACAAGAACATGGCCCGCCTAGGACTACAAGTGTCTGACATGGACACACAGTTTGGCAATGGGGTTATATTGCTCTTGCTGATCGGGCAGCTGGAAGGATACTTTGTTCATCTGAGTGAATTCTACTTAAATCCTTCCAATAACTCCGAAATGTGCGAGTCCCTCACTGACCTGAGAGGATCGGCTCGCACCTGCGCCTCTGATGTCATGGCTGTCTGCCTTCTTCACAGACACGCCCACGGTTACACCGGCAGAGCGGTACACTGGGTGGCCTCTTGTGAAACTAGTCTCACCTCGTCACTCATCCTACCAGGCCAGGAAAGTCTTCATCACAACTGTGGCAGAGACAGTCCTGGAAGAGAGGcctgggggtgggAAGAGGCAGAAGCAGTCAAGCCCTCCCGTGACCTGAGACACTGCCGGCACCAGACGGCACCACCTGCTGGGGCTAGGAAGCAAGTGAAGAATAGCAGACTTCCCCAGTGCTTCTGTGTGCCCTATGGTGCCCCTGttcagggagagagacagaGAGTGTCCCTGCGGTCGTGTGCCAATGGGTTGTGGGCACCAGCAGCTGGCACTGAAGGCCAGGAGCCCCTGGAACTCTTGTGCCTTGAAGCAGATGGGCCCTCGTTTGACTCCACGGCAGAAAGGATGGCCTCCATCAGCCCCGCCAAGCCCCACACCACCAGGAGGTGA

Function

GO: NA

KEGG:

id description
K06275 PARV; parvin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012768 True 1637 mRNA 0.51 16 7426981 7455406

Neighbor

gene id symbol gene type direction distance location
AMCG00012767 parvb,LOC103134461 coding upstream 4208 7396579 ~ 7422773 (+)
AMCG00012761 lyrm5a,LOC106576136,LOC107658915,LOC107725960 coding upstream 134077 7290851 ~ 7292904 (+)
AMCG00012762 NA coding upstream 147323 7247162 ~ 7279658 (+)
AMCG00012756 etnk1,LOC106609326 coding upstream 583640 6823862 ~ 6843341 (+)
AMCG00012755 NA coding upstream 631252 6783452 ~ 6795729 (+)
AMCG00012775 NA coding downstream 366566 7821972 ~ 7832788 (+)
AMCG00012777 NA coding downstream 406853 7862259 ~ 7864830 (+)
AMCG00012778 NA coding downstream 480974 7936380 ~ 7958975 (+)
AMCG00012786 NA coding downstream 578688 8034094 ~ 8034399 (+)
AMCG00012785 LOC103366393,LOC100698773,LOC102312910,LOC101485159,LOC102205266 coding downstream 586396 8041802 ~ 8077147 (+)
G39586 NA non-coding upstream 208522 7213745 ~ 7218459 (+)
G39560 NA non-coding upstream 528751 6897997 ~ 6898230 (+)
G39538 NA non-coding upstream 664703 6761965 ~ 6762278 (+)
G39490 LOC103376870 non-coding upstream 890588 6512648 ~ 6536393 (+)
G39445 NA non-coding upstream 1139045 6284934 ~ 6287936 (+)
G39668 NA non-coding downstream 253461 7708867 ~ 7713243 (+)
G39669 NA non-coding downstream 259091 7714497 ~ 7735268 (+)
G39737 NA non-coding downstream 450851 7906257 ~ 7909166 (+)
G39776 NA non-coding downstream 601613 8057019 ~ 8132564 (+)
G39838 NA non-coding downstream 813588 8268994 ~ 8269221 (+)
AMCG00012763 NA other upstream 45422 7344450 ~ 7381559 (+)
AMCG00012748 itpr2,LOC100196824 other upstream 908998 6476249 ~ 6517983 (+)
AMCG00012734 NA other upstream 1370149 6053148 ~ 6056832 (+)
AMCG00012718 NA other upstream 1603466 5807846 ~ 5823515 (+)
G39297 NA other upstream 1874214 5552417 ~ 5552767 (+)
G39670 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 other downstream 270082 7725488 ~ 7727828 (+)
G39709 LOC101154678 other downstream 379940 7835346 ~ 7836214 (+)
AMCG00012797 NA other downstream 880492 8335898 ~ 8345855 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other downstream 1080827 8536233 ~ 8569891 (+)
AMCG00012818 NA other downstream 1628256 9083662 ~ 9085700 (+)

Expression


Co-expression Network