AMCG00012770



Basic Information


Item Value
gene id AMCG00012770
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 7478394 ~ 7534439 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00012770
ATGTTATCTCTGattGTCCTAGATCCCCCACAAATCTCCTGTCTTCTGTGCCTGTACTATCCGTTAGATACACATGAGGACAAGAAGATGACTATCACCAGTCGGCAGTCCTTCAATGTCCTGGCAGTCATTTTCCTTCTGCTGTCAACAGCAGCTCTCTCCGCACACTTTCGAGTCTGTGAGCCGTACTCGGACCACAAGGGCCGCTACCACTTCGGCTTCCACTGCCCGCGTCTCTCTGACAACAAGACCTACATGTTCTGCTGTCACCACAACAACACCGCTTTCAAATACTGCTGCAACGAGACGGAGTTCCAGAAcgtcatgcagatcaacctgaCAGGGACGACCGACGACTTCCTGTACTACTCTGCCATGAACTACGAACTGTGTCGGTATTACCTGGTCAAGTGGGGCTTTGGTGGCCGCTGGCTGAAGCAGGCGAGGAGTCAGTGGAACAGTCCCATACAGGGGGAGAGCCAGCCACTGCCACAGCTGCTCCCTCAGGCCCCCCAGCCAAGACACAGCCTCAGGGCAGAAGCACCAAGTCCCACGCTCATGTCCTTCCACACCTCGACAGCCTGGTAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00012770 True 588 mRNA 0.55 5 7478394 7534439

Neighbor


gene id symbol gene type direction distance location
AMCG00012769 NA coding downstream 87560 7387968 ~ 7390834 (-)
AMCG00012765 NA coding downstream 134940 7333745 ~ 7343454 (-)
AMCG00012764 NA coding downstream 145374 7321944 ~ 7333020 (-)
AMCG00012766 NA coding downstream 188702 7278702 ~ 7289692 (-)
AMCG00012760 NA coding downstream 242751 7213745 ~ 7235643 (-)
AMCG00012772 NA coding upstream 167939 7702378 ~ 7719893 (-)
AMCG00012771 kcnj8,irk8,LOC108279966,LOC106576596 coding upstream 191049 7725488 ~ 7730823 (-)
AMCG00012774 abcc9,LOC108233250 coding upstream 200392 7734831 ~ 7742031 (-)
AMCG00012773 LOC106576597 coding upstream 222638 7757077 ~ 7787652 (-)
AMCG00012776 NA coding upstream 305930 7840369 ~ 7841180 (-)
G39580 NA non-coding downstream 327571 7150617 ~ 7150823 (-)
G39561 NA non-coding downstream 580157 6897987 ~ 6898237 (-)
G39546 kras,LOC103038241,LOC105900436,LOC107675271,LOC107675456 non-coding downstream 630998 6772968 ~ 6847396 (-)
G39556 NA non-coding downstream 682661 6786456 ~ 6795733 (-)
G39462 NA non-coding downstream 1190459 6285455 ~ 6287935 (-)
G39662 NA non-coding upstream 136797 7671236 ~ 7671642 (-)
G39707 NA non-coding upstream 292839 7827278 ~ 7828147 (-)
G39839 NA non-coding upstream 734555 8268994 ~ 8269221 (-)
G39929 NA non-coding upstream 1033613 8568052 ~ 8569889 (-)
G39952 NA non-coding upstream 1126009 8660448 ~ 8667024 (-)
AMCG00012751 NA other downstream 782470 6638480 ~ 6695924 (-)
G39487 NA other downstream 1022216 6455721 ~ 6456178 (-)
AMCG00012732 NA other downstream 1414577 6052364 ~ 6063817 (-)
G38490 NA other downstream 5294231 2183885 ~ 2184163 (-)
G38458 NA other downstream 5701173 1776854 ~ 1777221 (-)
AMCG00012782 NA other upstream 357050 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 1578002 9112441 ~ 9152405 (-)
AMCG00012858 NA other upstream 3205915 10740354 ~ 10753698 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other upstream 3323442 10857881 ~ 10862322 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 4705957 12240396 ~ 12271789 (-)

Expression



Co-expression Network