AMCG00012778


Basic Information

Item Value
gene id AMCG00012778
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 7936380 ~ 7958975 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012778
atgactAGAGacaaagaAAGCACCAGAaCGCCAGCCTCCATCACGGCCTTTGATGTGAAACCaactacagaaaaaatattaccAGGCAACATGCTCGTAGTGGTTCGGGAAATGATTGACAATCTGGTCGTCAGAAAGCCGATAGCCATTATCCACGCTGAAGACGTTCCTTATGGTCTGGACACTCATCCTGGGGGTGTGTGCTTTCTGTGGTCCGCACTGATTGATCCAGTCCGAGCCATCGCTGGGCGCAGATCCGAGGGAAGAGCGAGGCACACCGCCGACAAACCAACTGCTTCCGGGGCGGCGTCCCATTTAATCTGCCAGACACAGATGCCCTGCTATTACTCTGCCATCTGGGAACAGGTAACTGGCGACAGAGCACACTGGGTTCTCCAGCCCAGCAGCCTCACAGTGGTCTCTGGCCTGCTGACAAGCGTAGCTGTATTTCGCTTCTGGCCTCCCGAGTACTGA

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016740 transferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012778 True 474 mRNA 0.54 7 7936380 7958975

Neighbor

gene id symbol gene type direction distance location
AMCG00012777 NA coding upstream 71550 7862259 ~ 7864830 (+)
AMCG00012775 NA coding upstream 103592 7821972 ~ 7832788 (+)
AMCG00012768 NA coding upstream 480974 7426981 ~ 7455406 (+)
AMCG00012767 parvb,LOC103134461 coding upstream 513607 7396579 ~ 7422773 (+)
AMCG00012761 lyrm5a,LOC106576136,LOC107658915,LOC107725960 coding upstream 643476 7290851 ~ 7292904 (+)
AMCG00012786 NA coding downstream 75119 8034094 ~ 8034399 (+)
AMCG00012785 LOC103366393,LOC100698773,LOC102312910,LOC101485159,LOC102205266 coding downstream 82827 8041802 ~ 8077147 (+)
AMCG00012798 NA coding downstream 483429 8442404 ~ 8443642 (+)
AMCG00012807 NA coding downstream 612483 8571458 ~ 8607377 (+)
AMCG00012811 LOC106584661,LOC105006114,LOC108420373,LOC107716646 coding downstream 836193 8795168 ~ 8799438 (+)
G39737 NA non-coding upstream 27214 7906257 ~ 7909166 (+)
G39669 NA non-coding upstream 201112 7714497 ~ 7735268 (+)
G39668 NA non-coding upstream 223137 7708867 ~ 7713243 (+)
G39586 NA non-coding upstream 717921 7213745 ~ 7218459 (+)
G39560 NA non-coding upstream 1038150 6897997 ~ 6898230 (+)
G39776 NA non-coding downstream 98044 8057019 ~ 8132564 (+)
G39838 NA non-coding downstream 310019 8268994 ~ 8269221 (+)
G39951 NA non-coding downstream 707779 8666754 ~ 8667464 (+)
G40022 NA non-coding downstream 1092112 9051087 ~ 9053819 (+)
G40041 NA non-coding downstream 1132339 9091314 ~ 9093846 (+)
G39709 LOC101154678 other upstream 100166 7835346 ~ 7836214 (+)
G39670 kcnj8,LOC108279966,LOC107725582,LOC107655555,LOC107587158,LOC107729834 other upstream 208552 7725488 ~ 7727828 (+)
AMCG00012763 NA other upstream 554821 7344450 ~ 7381559 (+)
AMCG00012748 itpr2,LOC100196824 other upstream 1418397 6476249 ~ 6517983 (+)
AMCG00012734 NA other upstream 1879548 6053148 ~ 6056832 (+)
AMCG00012797 NA other downstream 376923 8335898 ~ 8345855 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other downstream 577258 8536233 ~ 8569891 (+)
AMCG00012818 NA other downstream 1124687 9083662 ~ 9085700 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other downstream 1153485 9112460 ~ 9130211 (+)
G40224 NA other downstream 2477932 10436907 ~ 10444447 (+)

Expression


Co-expression Network