AMCG00012783


Basic Information

Item Value
gene id AMCG00012783
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 7884831 ~ 7891119 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012783
ATTTGTTGGAAACCCCATGCAAAAAGGGTGTTGGTTTATTCCTGGAGCTATACTTTGGTGTCCAGGGAGAATCTTAATTCGCAGACTTGTTTTCCGGAGTCTTCCACTGTCCGGGGAGGGGAATATAAATAGTGATCGGGTTTAGACGGGTCAAAATGCCGAGCAATGAGCTGAAACAGAGGAAGAAAGGCACCAACCAAGGGAAGCAAAACGAAGACCCCCCGGAAACGGCGAAGGACGGAGGCGACCTGGCAAAAAAAGACGCCAGACGTTTGACTTGCGCAGCTGCTCCTGCGCTCGACCTGAGGACGGTGACGTGccttgtgtctctgtctgtctgcctggcGCTCACTTGGTTTGTGTTACAACAGACCACAAGGTTTGCAGAGGTGgaggaaaaatacaaactgcTGTACAGAAAGACTGCAGACATCCAGGGCCTGGAAAATGAAATCGGCAAGATTTCCAGACAGCTGGACTCCTCAGAGGAAGATCTTCAGGGGGCGCTCTCTTCAATGTCCTCGGTGACCAAGATGGAGCAAGACATCTCCTCTCTGCACACTGTCGTTAACGCCATGCAAGACAGTGAACGGTCAGTATCGCACAACATACAAAACATCAACAGGAGCTTCCAAAATGTGACCAACGTCTGGAAGGAAAGCTTGGAAGTCATCACGCAGGACATTGGAAACCTCAAGTCCGACTCCAAAGCCGCACACAACCAGATCACGGCCAAGATAAACGAGGCAGAGAAAAATGTTAAGACGATCGCGGAGAAGTTGGAGGACTTGGAGGACAGCACCAGGAGGAATTCCCGAGCCCTGGAGCGCACCGAGAACGAAGATATGGAGAGGCTGGAACAACATCTCAAATGGAACACCAAGCAGGTACTGAAATTGGAAGAGGAGCAGCAGTTGTTGGCCAACAAAGACCGTAAGCTGCTGGAGAAGATCACAGACTATGAGCCCAAAGCACAGCAATGTGAAGAGCATCTGCCCACGGTGGAGCATGCCGTTCACTCCATCCTCAGGGTCTCCTCTGACCTGGTCAACACGGAGAAGAGGATTGAGGACCTGACGATCCAGGTGTTCAACATGGAGGACAACATGCTCAAGGCCATTTCAGAGATCTTGGAGATAAAGCAGAGTCTAGATGCCCTGCAGGTGGACAATAGCATTCTAAAGCTAACAAACGATCTGGGCGTTATAAAGGAAATGGTGAAAGGGTTTGATGGAGCTAGACAAGAGCTGCCACTTGAGTTTGAAAATACCCAAGCTCTAATGAATAAGGTAAAGGACCATGCGGTGCTAACCCATATCGAAACTTTGGAGCAAGACATTGACAGGTTGAAACTCTGGTCGTCCAGCCTCACAGAGAAGAGGGAGATGCTACAAGAAAACATGACTGCGTTGTCTCTGGCTGTGGAGAAGATTGAGCAGACTACTACCTCCATCACGAAGGACGTGTCCGTAAAGGTGTCTGCTGTGAAGACTGACGTCCGGAGGATGTCTGGGCTGGAATCTGACGTTTCAGCCTTGTTATCGTCAACACACAAGCTGGAGGAGAAGGTGAAGCAAGCGGAAAAGATGATGGTTCAAAAGATCGGGGACGTTCTAGCCAGCAGCATCAACAGAATGATGGAGCTGAAGAGTTCCACCGAGAAGAACACGGAGAAGATTGACTTTCTTAAGAGGAAAGTAGCAGAATTAAAGGAAGAAGACGACAAGCTGTCACAACGGCTTTGGACCCTGGAAAGCGGGCGAGCCAGACTGTTAAAGACGGTGGCCTTCGCTGGCGACTTAAAACCCAAAGTGTTCGTCATCAGGAAGGACTTTGCTCTGCTGGAGCCTCGGGTGTCAGACTTAACTCTCAGGATCGGCAGACTGGCTTCAGATCTGCTGCAGAGGGAGCAGGAGATCGCTGTGTTAAAAGACAGTTTTACTAATTTAACCCTAGTCAAAACGGATCTTCAGAATGTAAAGCAGAAACTAAATGAAGTGCCTGAAGTTAGCGATCTGTTTgctcaaacaaaacaacctgctgaataagaacctttttgtgatttaatttaaaaacaaaaccccacaAAGTCTTGTGAGAAAGTTAAAGTGAGAATTGATTGTGAAATTGGTATCCATAGTAGTGTTCTATTCAATCTGTATGTCCATAATAATACATGGAAAGATTTGATTAGAATGGAAcgagagagaggaaaaataattcagaatcCTACTTTGCATTTTAACTATTTCAACTTACATGTTCAAAGTACCTGCTGTAGAAAATAGTTATTCGGGGACTAATCTAGtacagatttaaattatttctgagGTACTGAAAGGTCTGTGATGGTGCAGTAATGGATTTGATTAAGCTCAGCTGCATGTTCAGCTAGGTGGAATCATCACACCAAATCAGGTTGATGTGGAGTTATGTAGGGCAGTGATGTGAACTTCTGTTTCTGCAGATGATGACAGTTGAATCGAATAATGAGCTCAGGGGTCTGAATTGCCATTTTACAAGACCTCACGTTGAATGAAATCCAGATTAACCACGTGGCTGTACGGGACCGGGAATGAACTTCACAATTGTCTCATCTTTCAAGGCtgtggaattaaaaataaatatgtaaaaacatattCCTGGTTGACTTGGTTTTGTCTAAATAGAGCTGTAATCACGACAGGCTGGTTGGTGTAATTACAGAcctataattaatttaaagaacgCAAGAGGTGAAAAAATGGAAGTCAATGTTAAATAATTTTGTCTTTCataactgttaaaaatgttttgcttgtcTCTTTTGAAATGTCAGAATTTGTTTAGGGGATATGTATAGTAATGTGATGtggccttttaaaatgttttctttgcaaaatgtgtgtatggttttttatatatgtgtgtattagtTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012783 True 2919 mRNA 0.45 4 7884831 7891119

Neighbor

gene id symbol gene type direction distance location
AMCG00012776 NA coding downstream 43651 7840369 ~ 7841180 (-)
AMCG00012773 LOC106576597 coding downstream 97179 7757077 ~ 7787652 (-)
AMCG00012774 abcc9,LOC108233250 coding downstream 142800 7734831 ~ 7742031 (-)
AMCG00012771 kcnj8,irk8,LOC108279966,LOC106576596 coding downstream 154008 7725488 ~ 7730823 (-)
AMCG00012772 NA coding downstream 164938 7702378 ~ 7719893 (-)
AMCG00012781 NA coding upstream 17016 7908135 ~ 7928050 (-)
AMCG00012780 ttll1 coding upstream 47363 7938482 ~ 7951629 (-)
AMCG00012779 NA coding upstream 64627 7955746 ~ 7960641 (-)
AMCG00012784 NA coding upstream 69928 7961047 ~ 7975857 (-)
AMCG00012792 NA coding upstream 186701 8077820 ~ 8087653 (-)
G39707 NA non-coding downstream 56684 7827278 ~ 7828147 (-)
G39662 NA non-coding downstream 213189 7671236 ~ 7671642 (-)
G39580 NA non-coding downstream 734008 7150617 ~ 7150823 (-)
G39561 NA non-coding downstream 986594 6897987 ~ 6898237 (-)
G39556 NA non-coding downstream 1089098 6786456 ~ 6795733 (-)
G39839 NA non-coding upstream 377875 8268994 ~ 8269221 (-)
G39929 NA non-coding upstream 676933 8568052 ~ 8569889 (-)
G39952 NA non-coding upstream 769329 8660448 ~ 8667024 (-)
G40008 NA non-coding upstream 1008994 8900113 ~ 8901481 (-)
G40039 NA non-coding upstream 1192541 9083660 ~ 9085793 (-)
AMCG00012751 NA other downstream 1188907 6638480 ~ 6695924 (-)
G39487 NA other downstream 1428653 6455721 ~ 6456178 (-)
AMCG00012732 NA other downstream 1821014 6052364 ~ 6063817 (-)
G38490 NA other downstream 5700668 2183885 ~ 2184163 (-)
G38458 NA other downstream 6107610 1776854 ~ 1777221 (-)
AMCG00012782 NA other upstream 370 7891489 ~ 7904455 (-)
AMCG00012829 NA other upstream 1221322 9112441 ~ 9152405 (-)
AMCG00012858 NA other upstream 2849235 10740354 ~ 10753698 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other upstream 2966762 10857881 ~ 10862322 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 4349277 12240396 ~ 12271789 (-)

Expression


Co-expression Network