AMCG00012793


Basic Information

Item Value
gene id AMCG00012793
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 8302128 ~ 8306274 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012793
GGTAGGTTCAAAAAGGAGTTATGGTTTTGTTTcgtgttttattttggtttgttcgaTAACTCCACGAGTCCCGTCGGACGGCAGCCGCCCCGAGAGGTAAGACCGGCCTTCCCCGAGTTACAGTAAACAGTGACCGGCCTGTCACTGCAGCAGAGTCCATGGTTGTGCTCGGACTCCAAGACAATACcgttttgttttactatttgttGAGGTAAAACCATACAAAAAGTCCGTTTGTGGCTTTGTCTGTTGCGGAATGAAGTGACGTATTTGCTCGTTTTGTGTTGATGTAGATCTGTCAACGCGATGTCCAGCAGCAGATCAGTCTGCGAGGGGTGCCCGTCCCTCTTCCTGGACGAGTGTGAGGTCCACGGCCGGCCCGTCTTCATCGCTGACACCCGCTGGGCTGGGCTCAGAGCACACTGCCCCTCCGCCACTGCCCCTCTGCCTGATGTGTCCGGCATCCCTGGCTCGGGCCTGGGGGTGTTCAACCAGAGCGCCCTCTTCCCCAGAGGGGTGCATTACGGGCCCTACGAGTGGCAGCTGGCCAAGGCTGTGCTGAGTGGCTTCTCGTGGGTGATCCACggagagaaggaggaggtgaCTTACATCGATGCCCAGGACGAGACAAACTCTAACTGGATGAGgTTTGTTAACTGTGCACAGAATGAGGAGGAACAGAACCTCGTGGCCTTTCAGCACAGGACTACCCGTGGAAGAACAGGAGCCAATTCACAGATGACCACGCCCTGCTCCACTTCCTTCTCTTTTACACACCTTCTCTTACAGCCGTGCTTCTTGTACACTTTAGCAAAGCCTCTCTCTCAATTCCCTCTCTCATCCTCCTTCTCATGTTTAGTCTTTGCACTCCACTCTGCACACCATCTCCTTTCTCTCACCATCAGTCGCTTGACACAATGTTCACACGTCTTTCACAGCTGGTACTCATGTCGACccatctctctgtgtccccCTTCTTCTGTCTGTTTTCAATGATCTCACTGTCTGGAAGGTTTTTGCTTTCTCTGCCACTACACTCTtgctctctgtcactctcttgCTCCctatcccccccctccctctcagtgcagtgtctgtacagcagtgtccagtcagtgtgtatTAAGGCCCCCCACCCTGCCCTGCagccagtgtgggaagagcttcacttCTGTATCAAACCTATATaaacaccagcgcattcacagcTGGCTCCTGCTCCCTGTTTCAGTTCCCTGCTGGGCTCTGGTTTCTACCAGCTGAGACGGTTGCTGTGTATGCTGTGAATACATGTCACAAAATCAAACCAGTCCATCAAAACAGTGtcaattttaatataatgagtGTCTTTCCATCAGCCATTTCAAAATTGCACAATAAACACTAGGGCTGGGTAAGAATATAGATTTTCCGATTAATTGGGATTCTGGTTTGGACAATCTGATATCGATTCTTAAAATCCCGAGATAGATCAAGTGTGCATGCTCTGCTCTGCCCACAGCAAAATGGGATTCCGCAGGGAACCCCCCCCACCTCGTGCATGTCCTTCAATATGTCAGTGAGTGCCCAGACTCTTGCATTAAAAGGCTATGATTTAGCACATGGTCAATGATAGTGGGAAGTATGTCATTGGAAATATCTGTTTTGTGTCTTCCCCtttgagctgtttttttatgGGCTTGTGGTTGTGGTCCCCCTCTTTCTATCTTTCATCTGATTTGCTCCATTTCTTGCCAACACCAACTCACTGGTGACTTCTTTCATATGTGATTATAGACTGATTGTTGATTGAACAATTGAGCAATGAGGATTTGCACATATGCTGTAGAGATTCGCACTTGTGGGAGTATGTGTTTTCTGCTGTGAACAAattctcattttgtttgtcaAGACTTGCCCAATTGATTTTTGTGTCATGTGTAGAGTTGTTCACTGTTTAAATGTGCTTGTTATTTGCATTTTGGGTTAAAGCAACTATAAATGACttaatgttttgcaaaaatgtatttggttttGCTCATCTAGGTTATGATGTTGGTCATGTGGACCATAGTTTCATTCACATTAACTTAGCATCAAGAAAAACTAAGTGTGCTTCCTTAGTTTACTTCTGAACAAAAGTGAAGTGCGTTAAATTATAACACTGAGTTAGACTTCCTgtttttattctaattaaacTCAAAATGTGTACATGCACTGCtgtgtaaaaaacattttttaagtagAAATCTGAAGACTAAATCACTGTAAACCTTGTATTCTGTTCACTAATTTAAATAAGGATGCTGTTGTTtgttactgttaaaatacatcattttaaaaataatatacattctTGGACaatatattaacttatttttactATCAATTTTAGATGTACAGTTAATGTTTTAGTTGTAAAACACCTTTCTCGGCACAAGCGATCTGTGAGTGACTAGTTGTGTATAATTCTGTCGATTCTAGTTTGtatgatgtatttaaaatctgttGATATAACCACGTTATCTTTACCCTTCGATGCTGATATTTTAGAAGACTTGTCAAGCCAACTATTGCCATTAGACTGCACTGTAGCTGTATGGAATGTGTGTAactgtaataaattattaattcctAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012793 True 2619 mRNA 0.44 6 8302128 8306274

Neighbor

gene id symbol gene type direction distance location
AMCG00012794 ipo8,LOC106576166 coding downstream 3154 8273954 ~ 8298974 (-)
AMCG00012787 tmtc1,LOC107580673,LOC107656308,LOC107725887 coding downstream 50713 8245202 ~ 8251415 (-)
AMCG00012790 LOC106609308,LOC106576167 coding downstream 113765 8181514 ~ 8188363 (-)
AMCG00012788 tmtc1,LOC102198433 coding downstream 142244 8132431 ~ 8159884 (-)
AMCG00012789 kxd1 coding downstream 188542 8093426 ~ 8113586 (-)
AMCG00012795 NA coding upstream 7499 8313773 ~ 8325929 (-)
AMCG00012796 fam60a,LOC106584673,LOC107103542,LOC106926356,LOC103133713 coding upstream 25662 8331936 ~ 8337762 (-)
AMCG00012801 dennd5b coding upstream 35585 8341859 ~ 8374472 (-)
AMCG00012799 dennd5b coding upstream 78503 8384777 ~ 8392408 (-)
AMCG00012802 NA coding upstream 106770 8413044 ~ 8438978 (-)
G39839 NA non-coding downstream 32907 8268994 ~ 8269221 (-)
G39707 NA non-coding downstream 473981 7827278 ~ 7828147 (-)
G39662 NA non-coding downstream 630486 7671236 ~ 7671642 (-)
G39580 NA non-coding downstream 1151305 7150617 ~ 7150823 (-)
G39561 NA non-coding downstream 1403891 6897987 ~ 6898237 (-)
G39929 NA non-coding upstream 261778 8568052 ~ 8569889 (-)
G39952 NA non-coding upstream 354174 8660448 ~ 8667024 (-)
G40008 NA non-coding upstream 593839 8900113 ~ 8901481 (-)
G40039 NA non-coding upstream 777386 9083660 ~ 9085793 (-)
G40115 NA non-coding upstream 930626 9236900 ~ 9257451 (-)
AMCG00012782 NA other downstream 397673 7891489 ~ 7904455 (-)
AMCG00012751 NA other downstream 1606204 6638480 ~ 6695924 (-)
G39487 NA other downstream 1845950 6455721 ~ 6456178 (-)
AMCG00012732 NA other downstream 2238311 6052364 ~ 6063817 (-)
G38490 NA other downstream 6117965 2183885 ~ 2184163 (-)
AMCG00012829 NA other upstream 806167 9112441 ~ 9152405 (-)
AMCG00012858 NA other upstream 2434080 10740354 ~ 10753698 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other upstream 2551607 10857881 ~ 10862322 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 3934122 12240396 ~ 12271789 (-)
AMCG00012906 kin other upstream 4590246 12896520 ~ 12906333 (-)

Expression


Co-expression Network