AMCG00012804


Basic Information

Item Value
gene id AMCG00012804
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 8464160 ~ 8479179 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012804
atgCCCAGCCccaaatctttttttgtttaattgaagaCACTTCTCCATAGCCAGtcgtcttttcttttctttgtggtGTGGGAGATGCCGTCGGTCATTTAAGGGCTCCACAAAAGACTGGTGGAttagcttttttgttgttggtgttgttgttattgttttttgcaaCTTCAGTGAAACAATGGCAACTTTTTGTGGATCATTAACTATTTTCCGTACCTCCTaaaTTCTGACGAAGTTCTGCTCCTTGCAAGGAGATCTCTAGAGGCTGCTACATTGTCTTTCTGAGTGATCAGTGATGCAGACTTCTGATGTGTGGTACCAACACCGGCAGAATCAAGCCGTTTTCCAGTCTACTTCCAACACCACTGGTCCTTCCAAATTAAACCAGAATGCATTTGCTCACCCAGTGTATCCTGGTGGATCTGTCAACTACACCAGTGCACCTGGATCCTCCTATCAAAATACCTTTTCTCAGGGATTACACCAACACCAACATAGCAATGTTCAGATGAGGAATGTATCTGTGGAGCCTTCTGCTGAAATGGCAAACCGGATGCAGTTTCTCCAAGAAAGGGTATCCATCAATCCTGGGCTCCAGACTTCCAGACAGCCCACGGATCATTTTCGGATGTCTGCCCAGTCTGCCAAATCCTACAACACTGCCCGTTATGGGAGTCGCCAGCATTATCAGCCAAACTCTGCAAGTGCTAGAAATCAAAGTTTACCTGCTGCCCAGTACATGCAAAAACAATCTACTGCTGTCCTCCAGGCAGCAAAAGACCATGTTTCCCATTCTAGTTCCTCTACGGGTCAAGCAAATTACAATAGAAACAACCCGTCTGCTCTCCTGCAGCCATCAAGTAAACATGTTGGTTCCAACAGTAATTACAGTATAATTTTCCTGCCTGTCCAGAATGCGCAAGGGCAACATCTCAACCATGCAAACCAGCAGCCTACACTAGCAACACAAACCATGACCggaaatgtttttcataatttcacATGGACACCAAACGGAAACCTCTCGTGTAACGTATCGGACACCTCTCGTGTAATGCCACCCAACGTATCGGACACCCATCGCGTAATGCCACCCAACGTATCGGACACCTCTCGCGTAATGCCACCCAACGTATCGGACACCTCACGTGTAATGCCACCCAACGTATCGGACACCTCACGTGTAATGCCACCCAACGTATCGGACGCCTCACGTGTAATGCCACCCAACGTATCGGACACCTCACGTGTAATGCCACATGGCCAGCTGCAGAAGCAGCAGTATTACTGTTACGTCAACATGCCCCCTCAGGGAGGTAATACTGTACCTCAAAACTCTGTCCAAACAGGGCAGCAAAACTATAGTGCTAATCAGAATTATTCACAAAGGACAATGAATGTTGGTTTTTCTAATCTTCTTGCAGTGAATGCAAACCCTGCTTCAGATTTCTCTCTTTCCAGAGGCCAAAACAGTTATTATTCAGACCAGCGGCCTCCTGAACCTATGAATGTTTTTTCTCAGGCTCTTCGACAGTATAAAAACAGCCCTACTTCACCTGGAACTTGTTCAACTGTTTTAGCATCTAACCAGGTCCCCTCTCACCCCTATTATGCCAGTCATCAGCCTTCTCTGGGAGAAGGTTCCAGAATTGGGAATGGAAGTGTGGATATACAAGGAACAGGGGTCACTCAGCTTGCAAATGGAGCATCTGGGCCTTCTGGGAATTTTGACAGTGGTCGGAGCCAAATGCCTGTGTTCGTAAATGCAAACCACAATCGAAATGAATCTTTTGCAAAGGATGCCAATTATGTACATCCATCTTTTGTACAAAACCGAACTATGCAGCATCAGTACTGCCTCCCTCAAGCCCAAACAAGTGTTACCTCTCCTGCAAATCCTGTGGTGCCCACCTCTGTGTCCAATACCAGGATGTGCAGCTCGCTCTCCCCAGTGGTTCAGAAAAAACCCCCACCATATCCAAAAGGACCTGAGCATGCATATTTTGTAACCGTGAAGAAAGATGCCCATGGTGACGGGTTCACTCCTCATAATGTGATTCTAATTGGTAAGCAGTCTTCTGATGTTAATGCTGCACCACAGAATAGTACTGCTCCGCTCCAGCTCAGACAGCAAAGTCCGCAAATGGTGTCACAAAGTTCAACTTCAAACCACTTTGGCAGTGGGAACAGTGCCAAACCCTTTGGACAGCATGCTAACGAAACCCAGTGTGGCAATCCATATTTACCTGCTTATCTTCAAGCAAAAAACCTGTCAGAGGAAGCCAAAAGATCTGTAAATGTGCAGCTGCAGAAAGCATTAAGCCAGCAAAAAAGGTTTCCTCCAAAAGAACACTCAGTAGCTGAATGTAATACAGTGTCTGCTGCACTTTCTTGTCCTAAGCAACTGGTGTCTGAAGATATTGATCACACTTTGATGCAAGGGATGAGGAATGATGTAGCAGAGGTCCTTTGCAGTATTCTGTCAAAATGTAAAGGAAATCAGAAAGAAGCTTCTCTGACTCCAGACCTTAATGAGGGTCAAGCAGCACTTAATACATCAGTAAACCAGGAATCGGATCATATAGAAGAATCTGCTTCTGAGAATCTGGAATTCAATCGCAGCTTAATTGCCAAACTGCTCCGTGCCTCCTCCTCCGGGCCACGAACCAGTGAACTGCAGATTGCGATAGTTCCCCCTATATCACAGCCCTCCTCAAGTACTATGGACAATAAAGAAGCTTTCCTGAATACAGATAGTGatttaccttttaaaattatgaatgttTGGTCCCTAGCAGAAGACAATGACAAATTGGAAGGCAAAACCAGCTCTGGAAATGACACTGATTGCATTGTTAAAGAGGTTGAAACCTCAGGTTTGTCCCTTGCCGACACCAATTCAGAAAAGAAAGATGTTTTGGAAGTCTTGTCTGATCCACCTAAAAGTCCCCGCCTACAAAATGTTGATGCACCAGAACGCCAGAACTCTGTAATGGCAGAATCAAATTTCAAAATAACAGATGTGAAATCCCTTTCCGATTGCTTCTCTGCAGAAGGTTTGTTACCAAGTCCTGAAACACGGGTTATTCCGCAAACTGACAAATCTCCTGATGCAGAACCCTTAGCAGAGCCTCAAAAAAAGGATGCTGAAGAAAATTCCGACCTGGTATTAATTTCCAAAAAGAACTTGTATGATTTGTCTACAATCCCAGTAAATGAATGGACACTTAAGAAACTGGTAAAGTTAGTTGGATTTCTAAGTGACTGTGTAATTCCTTATGATATAAATAATTCTCTCactgaagaaataataaatcagtACTGGgatggggaaaaagaaaagttctTGCAGTGTTTCAACAATCCTTATGAAAACCTTCTTTCATGGTTTACATTTTGGAGTACAGGTGCTGCTGTTAACAAACATTCTGTGATATTTACGGAAATGAAGGCTGGatgttttgagaaaataaaagaaaattgtCAAATTATAGATTCGCAAACAACTCAGCCCACCCAGTTAGATTACAAGTCTTCATGGTTAAATCTTAATGAGCAGCTTGATGATATAGATAAAGAATCTGCCTTTCCCGAGAGCCTACACATCGGAAAACCAACTTCTgagatggaaaaaacaacatgtgcAACAGAAACTAAAGACGATACAGCAGATGTTGGCAAGACTCATAATCTGGAAGTCCTGCCTTCTGTTAGTTCTACAGATACATTTAATGTAACCACATCTCCTAAAGCAACAGATGTCACTGCTACAACTTCCAGTGACCCTCTGTGTAATGCACAAATTAACGTTTTAGTACCTGCTGATGCAAATGAGTTTTTCTGTGAATTTCAGAATGAAGGTAGCAAGGAGGAGACCTTGAATTGTGTGTCCCCTGTGGAAGAGACCTTGAAATGTGTGTCCCCTGTGGAAGAGACCTTGAAATGTTCATCACCTGTGGAAGAGACCTTGAAATGTGTGTCACCTGTGGAAGAGACCTTGAAATGTGCATCACCTGTGGAAGAGACCTTGAAATGTGTGTCACCTGTagaaaaaaatgatgaaaatgaaaataatcctCCACTTTACTGTTGTATTTCTCGTTGGATTGAAGATCTTAATGGTAATGGTGGAAGTTCAAGCTGCCTGTGCCAGTCTCGGACCAAATTGGAAAAAGTGACGGATCAATTGATAGAAGAAAAGCCTTCTGAAATGAGCAATGGCAAAATGCCTGCAGAATATCTTTCAGATCAGCAATTGCAGGAAGAAGACCTTTTTGAAACCCTATTTCCACTGGATCTTAGCACAGTTTCAAGGAGCACCACTGAAGTGAAATCTATAGATTTGCATTCAGCGGGTGAGAAACCTTGGAAGGACAATGATCTGAATTGCCAAATACGGACTTCAAATTCACCGACTCCAGTGACGGAGAATGATTCTAAAGCTGTTGATGATGAGCCAGAAAGCAGAGCCCAGAGGATGAACATCTCTATAGATGCAATACAGGttttacacaaaaaatgttCTCAAATGCAGCTTCCTTTTAGAAAGAGTGAAGATCACATGCAAGGGCTGCATGGTAAAAGGAAGAGAGAATCTGAAAACAATGACCAGGATCAGAGTCATTCTGGCATTTCGCCAGCTCCCAATAAACCATCCCTGAGTCCTAaagaatatgaagaaaaaagaaagcccCATGTTCAGTCAGTTGAGCTTCAACATAAATGTTCTAAAGGTGATGGCAGTGGTGATATTaaacagaaatttaaaaaacGCAAAAGAGAAAAGGGCCATGAATACCCAAGGCCAAAAAGTAGAGAGAAGAGGGATGcagccaaaaacaaaactctgtCTGAAGCAAAATCAACTGAATCCAACAGGGACTCGAACAAGACGGTCAGTCTCGTGCTGTATGGCTCTACAGCCCCAAATCGTACACCTCTTGGTTCAAAGATGGGACTAAAGGGTTCCGACAAAAGTCAGAGTCTTGCTTCAAAGTCACGACCATTTGGAGAGAAAATAACCCCCCCTTCAGTGATCAAGTTAGTAGTTCAAAGCCTTAAACAGGATTGCACAGTCAATGCAGAAAAGGATGCAGAATCCCAAAGCCAGTCTGCAGCCTCCAGAACAAAGAAACGTAGGCATCTTGAGATCAACCGTGACTGCAACAGCCTTGAAAAGACCAGTGGATGGAAGAGATCTGACAAATCAGAACTTCACAAAGCCAAACGCGGTGAAGAACGCAAGAGAAGAAAGGCAAAACTCTTAGATTATCGGTCCCCTGAGATGCAGAGAAACCCAGGTCAAAGGAAGGTGGTTAGTCCAGTGAAAATCAAGAAAAGGTATGAActtcaggaaaggaaaaaaactgatCACTTTCCTAAGCCTGTGCCAGCTGCAAATGAGGAAAGGCCCACAGCTTGTAAAATGAGTGACAATCTCCCCAAATTAGATTGGAGAAGGCCAGCATCGCAACACGAACAAAAGGAAATGGCTTATCGTAAACTGAAACGGAAAGATCGATTGAAGAATCACAGTAGTAGTGTAGTGGCACCCTTGGTCATAGTTCGGAATCCAAAGCCTGTCTTCATCGTGCCAGAAGCTCAAGTAAAAAGTCATGATGAAACTGAGATGCCTACCTTGACACCTCCAGTGGAGGAAAACAAAGTTCTACATTTCAACCTGTTGCCTGACGATAACCACTTTGGTTTTAAtgatacagattttaaaaaggaaactaaGAAATCCTCAAGTTCTGAAAAGAAGTCCAGTAGTCGGAAGGCTGCAAGTGAAGCTGATGTTCCCAAGAAGCAACATTGGAAAATACAAGGTTACTGGTCGAAGAGTGCTGAGGCCAGCACTCCTGTGCAAGAACAATCATCTCCTCAGCTGGACACCCCCCCACCAACTCCCACCAGCGCCACCTCTAATGCCACCTTTCAGGTGTTCAAGAAGAAATTtttggaaaaggaaataaatattgccAATAAGTAATTGTATCTACGAATGTTTTAGAATAGTGGTGGTTTCCGTCACCCATTCCGTGTGTTAATTGAGAATGTATGAGTCTTGCTACAAAAGTGATTATTTGAGTTTGGTTTTATGGTTTTTGAAAAAGTTGCGGTCTCTTTCTGTTTGATATGATACTTTGCTGCTACGATCATTGCTGCTATATCATTGTCAGTGGGCCATAGAGCAGCAACCCCTTAGATCAGCGTGGCATCTATGACCCTgcagtgttatcagtgagagTTGCATTGGCCTCTTTGAACCTATAGCTCTGTTTTTGTGCTGAGCACTCTTTCTTGTATTCATCTCCCATATTTGTAGGAGTATTTGGGCAGCAGAGCCGATTTCTAAACCATAACCAGTTCCAACCTGGGGCAGTATTAAAGCGGAGGGAGATCAAAGCAATTAATCCATCTGCATGAATATCTAACCTAACATTCAGGAAGTGAAAATCAGCTGTTCTGAATGGTGGTATAAAATATGGGTTCAGTTTGAGCATATTTTTGAAcaagcctgtttttttttttttcagttgtactCAGGATATTTAAGCTTCACAAAAAACAAGGATATGGAATTTCAGGTTATTCTGTTATCAATTAATGATTCATTTGGACCTTAAATGTTTGAGGAAAATTAACATGCTTTCTTGCATAGTTAATGGATAACTGCTTTCAGAGGTCTTTTGGTAGTTTATTAACTTTGCAGATTTGAATCTcaaaaaatgacatttacaGAATATGCATAAAGACAGCTGAGATGCTACTATAGATAGTTTTAAATTTTATATTCAGATTTAACAATTCCCAACTGAAATCCACCTCACTGCACAGGTAAACTGTGATGTGTTAACTAATGTGCCTTTAAGGATTTGGTAAGAAATAAACCATACCTTATTTTCTCGAAAGACAACAAGTGGTCTTTGAAATGGTTTAAATGAATGCTTACTGCAATTATAGAATTGTCCCTTTTGTCCCCAGTTTGacttaaaacaaaagtgttcatatttaaaaaagattcTTTAAAGTACCTTTACTGCCAAAAGTGAGAACCATATTACCCTTCTATACCAcacaggaagaaaacaaatctataaagACGCATTAGTTGCTTAAGTGTATGGTCTTCAGAGTACAAAGGCTGAAACAGtctgcagaaacaaaaaagggatCTGAATAGTCGAACAACCCTTTTAATATTTGGCAATTCTCTGTGAATGATTTTACATTCTCCAGGTCCTTCACCGGTAAGCTGttcctttttcagaaaacaaaatgcatattcaagtaaaactgcttttttatttatttatttttaaacctgacTTAACTTGTAATGGTATAGTGTCAACTTTtgccaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012804 True 7371 mRNA 0.42 4 8464160 8479179

Neighbor

gene id symbol gene type direction distance location
AMCG00012800 NA coding downstream 12007 8443996 ~ 8452153 (-)
AMCG00012802 NA coding downstream 25182 8413044 ~ 8438978 (-)
AMCG00012799 dennd5b coding downstream 71752 8384777 ~ 8392408 (-)
AMCG00012801 dennd5b coding downstream 89688 8341859 ~ 8374472 (-)
AMCG00012796 fam60a,LOC106584673,LOC107103542,LOC106926356,LOC103133713 coding downstream 126398 8331936 ~ 8337762 (-)
AMCG00012806 NA coding upstream 20458 8499637 ~ 8532718 (-)
AMCG00012805 NA coding upstream 56989 8536168 ~ 8553089 (-)
AMCG00012809 NA coding upstream 133063 8612242 ~ 8616101 (-)
AMCG00012808 mpped1,LOC106959763,LOC103131679,LOC108250209,LOC107103222 coding upstream 158758 8637937 ~ 8650040 (-)
AMCG00012813 scube1 coding upstream 188138 8667317 ~ 8681599 (-)
G39839 NA non-coding downstream 194939 8268994 ~ 8269221 (-)
G39707 NA non-coding downstream 636013 7827278 ~ 7828147 (-)
G39662 NA non-coding downstream 792518 7671236 ~ 7671642 (-)
G39580 NA non-coding downstream 1313337 7150617 ~ 7150823 (-)
G39561 NA non-coding downstream 1565923 6897987 ~ 6898237 (-)
G39929 NA non-coding upstream 88873 8568052 ~ 8569889 (-)
G39952 NA non-coding upstream 181269 8660448 ~ 8667024 (-)
G40008 NA non-coding upstream 420934 8900113 ~ 8901481 (-)
G40039 NA non-coding upstream 604481 9083660 ~ 9085793 (-)
G40115 NA non-coding upstream 757721 9236900 ~ 9257451 (-)
AMCG00012782 NA other downstream 559705 7891489 ~ 7904455 (-)
AMCG00012751 NA other downstream 1768236 6638480 ~ 6695924 (-)
G39487 NA other downstream 2007982 6455721 ~ 6456178 (-)
AMCG00012732 NA other downstream 2400343 6052364 ~ 6063817 (-)
G38490 NA other downstream 6279997 2183885 ~ 2184163 (-)
AMCG00012829 NA other upstream 633262 9112441 ~ 9152405 (-)
AMCG00012858 NA other upstream 2261175 10740354 ~ 10753698 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other upstream 2378702 10857881 ~ 10862322 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 3761217 12240396 ~ 12271789 (-)
AMCG00012906 kin other upstream 4417341 12896520 ~ 12906333 (-)

Expression


Co-expression Network