AMCG00012832


Basic Information

Item Value
gene id AMCG00012832
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 9375167 ~ 9382501 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012832
ATGGGCAACGAAGCTAGCCTGGAGGGCGGGGAAGGGGGGCTCTCCGGATTACCAGAAGGGGTTGCGGGAGATGGAAAGGGGGGCTTTATCCAGATCCCCGCAGGAATGGAGGCGGATCTGAGCCAGCTGAGCGAGGAGGAGAGGAAACAGATCGCAGCCGTAATGCAACCAGAGTTAGATGCACACCATCAGCCCAGACAGCCAGGAAAACCCCCAACCCAGGGGCCTTCTGGTATCAGTAAAAGCCAGACAGTTGATGtcttcaaaactgaaaaaatccCACCCGGAAGGAGCCCCTCTTCAATCAGTCTTTTAGAGTCTCGATCAAGGCCTGAGGCCAGAGAAGAACAGAAAGCAGCCATGATGCCCAGTTTCCTTAGCGAGGGCAACCCCCTCAGTGCAATGTCCTCTGTTGTCAATAAATTCAGCCTCTTTGGGGATTCAGATTCAGATGAAGCTGCCAAGAAGCAAAAAGGTCCCCAGCAACAACCGCCTAAATCACCTGGACCACAGCCGGGGCCTGCTAAAGCTCCTCAGCAACAAGGACCAAGGccaggacagcagcagcagggttCCCCTAAACCAGGGCCTGCTAAGCATGGAACACAACAGCAAGGGCCTCCAAAGCCAGGAATGCAAACACAAGCCCAACCCCCACCTGGGCCCCAGCATCAAGGGCCAGGCAAACCTCCATCTCAACAAAAAGGTCCcctccaacaacaacaacaaccacaacaacaagtGACTGGAAAACTTGGGCCTCAGCAGCAAGGGCCTCCTAGAGCTGGAACACAACAGCAGGGCCCTCCTCCCTCAGTCCCCCAGCAACAAGGCTCCCCCATGCCTGGCATACAACAGCAAGGCCAGCCTAGGGGAGGACCACAGCATGCCACCCCCATGCCTCAGCAACAGGCTCCTGGGAAATCTAGGCCTGAGCAACAAGGAACTGCCAAGCCTGGGACTCAACAACAAGCTCCGCCTGCCTCTGGAGCTCCACAGCATGGGCCGGCCAGGTCTGggccacaacaacaacaagggcCTGTGAAGCCCGggccacaacaacaacatgggCCTGTGAAGTCCGGGCCTCAACAACCAGGGCCTCAGCAACCAGGACCTGCGAAGCCTGGGACTCACCAACCAGGGCCTGCCCAGATGCAAGGGGCTGCTAAACATCCTGCAGAGCAGCCAGGTTCTGGAAAGGCTCATTCTCGGCAAGGCGGCCTTTCTGGTTCAGCAGGTACGGGCCCCAGTGCTGCTCCTGCTGAGAAGAAATCTCTTTGTCCTCTCTGTAAAACCACTGAACTACTTCTTCACACACCAGACAAGGCTAATTATAACACCTGCACACAGTGTCAGACGGTGGTGTGCAGCCTGTGTGGATTCAACCCCAATCCTCACATGACGGAGGTCAAGGAGTGGCTCTGTCTCAACTGTCAGATGCAGAGAGCACTGGGGATGGATGTGTCTGCACCCCCGATGGCAAAGCCTCAGCAACAGCATCCCAAACAGCCATCCGCCCCTGGTTCCCCTCAGCGAGCCAAACAGGCATCGCCAGCACCCCAGCCTCAAAAGATTGAACCAAGCAAAACCCCCGAAATTAAGAAAGCCACCCCTGTAGCCAAGCAGCCGGAGACCCAGCCCGTAAAGCCTGCTGCCGCCTCCGCGGCACAGCAACCAGCAGTACAGAAGCCATCGACTCCAGTGCCTGATCAGCACAAACCGATACAGCAGAAACCGCCAGGGGCACAGAAAGCCCCAGATCAGCCTTCCTCTCCAGCACCTGGAGTAAAGCAAGCTACACAAGGCCCCCAAGGAACCCCTGTGCAGCAAAAGCCTGGTGCATATCCTCAAGATCTTGCAAAGCCACCACCGCAGGTTCCTCCAGCTGATCCGAAACTGCAGCCTCAACAAAAACCCACTACCAAacccacagagacacacggGGAAGCCAAAGGTCAGAAAGCAGGCGAGCCGGCGAAACAGCCACCGATGCAACAGCCGAAAAGCGCTCCACCGAAAATTGATCCCAAAACTAGCCGTCCATTACAGGAGCCAGTGAAGTCAGAACTGCCAATGCCAAAAGGTTCCCCAGGACCACCTTCTGCCAAATCTGCACAGCCTGCACAGACTCAACCAAGTCAGCCGCCTCCCAAACCTCAAGAGCAAGGAAGGCGCTTCAGCTTAAACATCGGGGGATTGGCCGAGACACCCAAGCCTCAACCTACTACTCCCCAAGAAACTGTCACCGGGAAGCTGTTTGGATTTGGATCTTCCTTTTTCAGTCAGGCATCAAACTTGATCAGTACAGCTGTGCAACCAACAGATCAGCCCGCTCCTGCCCAGCTGGCCTCTGCCCACCCGGCTCCCGCCCAGCCAGCTCCTGCGCAGACCAACGCCAAGCAGCCTGCTTCAGCCCAGTCCTCGCCCAAAGTGACTCCTGCGAAGAAGGAGACCAAACCCCAAGTGGCACAGAAACCAGAGCAACCCCCAACAGGGAAAGCCCTTCCTCCCGCTCAGGAGAAGAAGCCCATCCCTGTCACAGAGAGTAAACCACAAGCGGAGGTGCCAAAGGGAGCGGTAGCAAGCACCGCCCCGGCAACAACAGCCCCCGTACCTCCAAAATCCACACGGTCCAACTGTCCACTCTGCAAGGTCGAGCTCAACATTGGTTCTAAGGATCTGCCTAACTATAACACCTGTACAGAATGCAAGAATACCGTATGCAATCTATGTGGATTTAATCCGATGCCCCATCTCACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012832 True 2766 mRNA 0.56 3 9375167 9382501

Neighbor

gene id symbol gene type direction distance location
AMCG00012828 btg1,LOC106609569 coding upstream 120612 9251194 ~ 9254555 (+)
AMCG00012819 NA coding upstream 263391 9095412 ~ 9111776 (+)
AMCG00012816 NA coding upstream 297266 9064317 ~ 9077901 (+)
AMCG00012817 nfyb,LOC106561000,LOC107658836,LOC107656315,LOC107592261,LOC107743639,LOC107696291 coding upstream 331626 9039322 ~ 9043541 (+)
AMCG00012815 NA coding upstream 503009 8854081 ~ 8872158 (+)
AMCG00012833 NA coding downstream 29825 9412326 ~ 9469248 (+)
AMCG00012834 NA coding downstream 251733 9634234 ~ 9691339 (+)
AMCG00012835 NA coding downstream 319769 9702270 ~ 9723930 (+)
AMCG00012836 snd1,LOC107738807 coding downstream 369135 9751636 ~ 9770671 (+)
AMCG00012838 snd1,LOC102797100 coding downstream 500623 9883124 ~ 10314250 (+)
G40121 NA non-coding upstream 80525 9294331 ~ 9294642 (+)
G40119 NA non-coding upstream 110074 9264878 ~ 9265093 (+)
G40041 NA non-coding upstream 281321 9091314 ~ 9093846 (+)
G40022 NA non-coding upstream 321348 9051087 ~ 9053819 (+)
G39951 NA non-coding upstream 707703 8666754 ~ 8667464 (+)
G40145 NA non-coding downstream 91044 9473545 ~ 9473868 (+)
G40146 NA non-coding downstream 91472 9473973 ~ 9474220 (+)
G40203 NA non-coding downstream 789753 10172254 ~ 10172463 (+)
G40214 NA non-coding downstream 992530 10375031 ~ 10424371 (+)
G40303 NA non-coding downstream 1357931 10740432 ~ 10743104 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other upstream 244956 9112460 ~ 9130211 (+)
AMCG00012818 NA other upstream 289467 9083662 ~ 9085700 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other upstream 805276 8536233 ~ 8569891 (+)
AMCG00012797 NA other upstream 1029312 8335898 ~ 8345855 (+)
G39709 LOC101154678 other upstream 1538953 7835346 ~ 7836214 (+)
G40224 NA other downstream 1054406 10436907 ~ 10444447 (+)
AMCG00012848 NA other downstream 1158227 10540728 ~ 10541960 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other downstream 3070738 12453239 ~ 12500402 (+)
G40629 NA other downstream 3106074 12488575 ~ 12535929 (+)
G40999 metap2,LOC108428789,LOC100194705 other downstream 5045812 14428313 ~ 14433201 (+)

Expression


Co-expression Network