AMCG00012842


Basic Information

Item Value
gene id AMCG00012842
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 10437321 ~ 10441546 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012842
ATGATCATGTGTCTTGGTGATGTCATGCACTCGTTTTGGAACAAAAGGGTGCGAGAGAGAAAGTCAGGctggacaggacaggacaggacaggacaggacaggacaggacgaGATCGTCTCACGCCACAGCATCGATACACAAAACCTTCACAGGCGGATATTGATCTGTCCCACAACTGCGGCACTGGGGACAACCCCACGCTAATTCTGGGGCAGAAAATACCGGCAGAAAATAGGATCCACCCCGCTTGTTCCCtccacccctcccctcccccggGCAAAGCGCCGTCCTCCATGTCTACGTCCTTTTCCTCTATCCTCCCTCCTATCTCCACGCTGCCTACTGACTGGTATGCTTGCTGCTCATCATGGGCCGCATCCTACGCTAGGCCCTGGTTTCCTCTTCCGCGGTCCTCGCCTCGCTCCATTGCTGGCGGCGGGCTCCATCCTTCCAAGCCCCTCTTTCGCTGGTGCCCTCCCTGCAGCCCCTGGCGGCTGTTTCCCCGGCCCTCCGTGCAGATCTGTGTGGCTCTTTCCCTGCTCGTGAAACGAGTCGGAAAGAGTATGTTTCCTCGCCTTCAGGGACCAGTGCAGGGAGTCAGTCTCCTGTATTTTAGGGTCTTCAAGAAGTATACTGTCGATTACTACAATGACAGCATCAATGTCTTCTGGAACACACCTGTCAAAGCCCCAGCGCTGTTCTTCTTCTGTGACAATGATCCACTCAGTGACAGTGAAGAGGTAGAGAAACTGACTGGGCACTGGCAGACACAGGGCATCAGTGTGGGGAAGAAGCGCTGGAAGGAGTCCATTCATGCTGGCCATCTAAGGGAGCACCCTGAAGACTACCTGACGACACTACATAACTTTGTACAGTCTCTCAACCTTTTTGgtttaaaagcaaaattgtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012842 True 912 mRNA 0.54 4 10437321 10441546

Neighbor

gene id symbol gene type direction distance location
AMCG00012840 NA coding downstream 771 10423377 ~ 10436550 (-)
AMCG00012837 LOC108442864,LOC103033525,LOC108263937,LOC107594935,LOC107738417,LOC107559378,LOC107672593 coding downstream 554551 9880836 ~ 9882770 (-)
AMCG00012831 NA coding downstream 1186398 9171266 ~ 9250923 (-)
AMCG00012830 NA coding downstream 1266346 9152556 ~ 9170975 (-)
AMCG00012826 hsp90b1,LOC107656288,LOC106609356 coding downstream 1343391 9087018 ~ 9093930 (-)
AMCG00012841 NA coding upstream 2545 10444091 ~ 10489781 (-)
AMCG00012845 impdh1,LOC108442450,LOC107559456,LOC107665545,LOC106561215,LOC107710381 coding upstream 51816 10493362 ~ 10525888 (-)
AMCG00012847 NA coding upstream 110879 10552425 ~ 10556698 (-)
AMCG00012846 NA coding upstream 125885 10567431 ~ 10574509 (-)
AMCG00012851 NA coding upstream 171063 10612609 ~ 10626275 (-)
G40206 LOC101154678 non-coding downstream 211364 10225694 ~ 10225957 (-)
G40172 NA non-coding downstream 746410 9686810 ~ 9690911 (-)
G40115 NA non-coding downstream 1179870 9236900 ~ 9257451 (-)
G40039 NA non-coding downstream 1351528 9083660 ~ 9085793 (-)
G40008 NA non-coding downstream 1535840 8900113 ~ 8901481 (-)
G40266 calu,LOC102225510,LOC105939814 non-coding upstream 108111 10549657 ~ 10551377 (-)
G40323 NA non-coding upstream 286949 10728495 ~ 10728820 (-)
G40325 NA non-coding upstream 296436 10737982 ~ 10738597 (-)
G40326 NA non-coding upstream 297539 10739085 ~ 10739378 (-)
G40327 kcp,si:dkey-266m15.6,LOC107564914 non-coding upstream 298349 10739895 ~ 10740301 (-)
AMCG00012829 NA other downstream 1284916 9112441 ~ 9152405 (-)
AMCG00012782 NA other downstream 2532866 7891489 ~ 7904455 (-)
AMCG00012751 NA other downstream 3741397 6638480 ~ 6695924 (-)
G39487 NA other downstream 3981143 6455721 ~ 6456178 (-)
AMCG00012732 NA other downstream 4373504 6052364 ~ 6063817 (-)
AMCG00012858 NA other upstream 298808 10740354 ~ 10753698 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other upstream 416335 10857881 ~ 10862322 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 1798850 12240396 ~ 12271789 (-)
AMCG00012906 kin other upstream 2454974 12896520 ~ 12906333 (-)
G40778 LOC107575789 other upstream 2673347 13114893 ~ 13115487 (-)

Expression


Co-expression Network