Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012848 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 10540728 ~ 10541960 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012848 | False | 189 | mRNA | 0.50 | 1 | 10541282 | 10541470 |
| TU50179 | True | 946 | lncRNA | 0.38 | 2 | 10540728 | 10541960 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012844 | NA | coding | upstream | 6123 | 10531979 ~ 10534605 (+) |
| AMCG00012843 | NA | coding | upstream | 48251 | 10471865 ~ 10492477 (+) |
| AMCG00012839 | NA | coding | upstream | 130447 | 10409327 ~ 10410281 (+) |
| AMCG00012838 | snd1,LOC102797100 | coding | upstream | 226478 | 9883124 ~ 10314250 (+) |
| AMCG00012836 | snd1,LOC107738807 | coding | upstream | 770057 | 9751636 ~ 9770671 (+) |
| AMCG00012850 | calua,LOC108432523 | coding | downstream | 4591 | 10546551 ~ 10550066 (+) |
| AMCG00012849 | tnpo3,LOC106609131 | coding | downstream | 48238 | 10590198 ~ 10608349 (+) |
| AMCG00012859 | NA | coding | downstream | 124800 | 10666760 ~ 10685175 (+) |
| AMCG00012860 | NA | coding | downstream | 144593 | 10686553 ~ 10689804 (+) |
| AMCG00012855 | NA | coding | downstream | 157081 | 10699041 ~ 10740121 (+) |
| G40214 | NA | non-coding | upstream | 116357 | 10375031 ~ 10424371 (+) |
| G40203 | NA | non-coding | upstream | 368265 | 10172254 ~ 10172463 (+) |
| G40146 | NA | non-coding | upstream | 1066508 | 9473973 ~ 9474220 (+) |
| G40145 | NA | non-coding | upstream | 1066860 | 9473545 ~ 9473868 (+) |
| G40121 | NA | non-coding | upstream | 1246086 | 9294331 ~ 9294642 (+) |
| G40303 | NA | non-coding | downstream | 198472 | 10740432 ~ 10743104 (+) |
| G40436 | NA | non-coding | downstream | 561865 | 11103825 ~ 11159087 (+) |
| G40496 | LOC103376870 | non-coding | downstream | 752257 | 11294217 ~ 11354359 (+) |
| G40498 | NA | non-coding | downstream | 863045 | 11405005 ~ 11405356 (+) |
| G40497 | exoc4,LOC107744930,LOC107725510,LOC107585070 | non-coding | downstream | 924261 | 11466221 ~ 11468218 (+) |
| G40224 | NA | other | upstream | 96281 | 10436907 ~ 10444447 (+) |
| AMCG00012820 | nt5dc3,LOC102307862,LOC107753643 | other | upstream | 1410517 | 9112460 ~ 9130211 (+) |
| AMCG00012818 | NA | other | upstream | 1455028 | 9083662 ~ 9085700 (+) |
| AMCG00012803 | sult4a1,LOC102784496,LOC106576158 | other | upstream | 1970837 | 8536233 ~ 8569891 (+) |
| AMCG00012797 | NA | other | upstream | 2194873 | 8335898 ~ 8345855 (+) |
| AMCG00012894 | gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 | other | downstream | 1911279 | 12453239 ~ 12500402 (+) |
| G40629 | NA | other | downstream | 1946615 | 12488575 ~ 12535929 (+) |
| G40999 | metap2,LOC108428789,LOC100194705 | other | downstream | 3886353 | 14428313 ~ 14433201 (+) |
| AMCG00012940 | LOC107748465 | other | downstream | 3974823 | 14516783 ~ 14529806 (+) |
| G41059 | NA | other | downstream | 4090397 | 14632357 ~ 14633413 (+) |
