AMCG00012852


Basic Information

Item Value
gene id AMCG00012852
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 10644390 ~ 10656133 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012852
AACCTATGCCTTGGGGGTAAAGATGTCTATGCTGCAGTCAAAGAAAACAGTCCCAATGGAGCATTCATTGCAAACCTCAGCATTATTGGGGATCCTGGAGCCAATAGCATTCGTTTGTGCCTAACGGGGGAATACGCTGACTGGTTTTTCTTAGAGGGCAAAACCATCAGGTTGAACACATCATCAACAAGAGTACTGGATCGGGAGGTTCAAGGATCTATTTTGATAGCATCCATGACTTGCTATGAAGATGACACAATACAGagtGTATACAGACTCATGGTGGAGATcctaaatgaaaatgacaacagacCAAGGTTCCTTGAACATTCAATTACAACATTTAACATAAGCGAGCTGACTGCAGTGAATACTGTTGTATTCACAGTGCAAGCTAGAGATGCAGATGATgattatatcatatatattattgacCAAACAACGTCTGATGCAAGCTATTTCAGGATAGACTTACCGAACAGTGGCAAAGTGGTGCTGACCAAACCTTTGGACTATGAAACAAAAACTCAACTGCAGTTTGTCATCTTTGCTGTGGTAGGTAATAACAAAAGGGCCAGTGGTTTCATTGCTATCAGCTTACATTTGTTCACAGAAATGAACACAGAGCAAAGGTTTAACACTTCAGCCACCATAAAAATCAACATTCTGGATGGAGATGATCAGTATCCACAGTTTCATCCATGTACCCTCCTATCCCAAGACCAAACCCGATCGGTCTGCACTAACCCTGTTTATATGGTGAACATCACAGAAAAACAGCAGGGCATCACCTTGCATTTTTCTCCGGGTCCCATTCACGCAGAGGATGGGGATAGAGGAATAAGGACCCAGTTATCGTACACAATTTTATCAGGGGCTGACAATGGCAGGTTTCGAATCAACAATGTTACAGGAGAAATTGTTATGACAAGGCCTGTGGAGAACAGGTTTTTGACACCCACCCTCAGGCTTCGCATAATGGCTTTTCAATTGGATGACCCAAAAAAGTATACAGTGGCAACAGCCCTGATCAGAGTGCTGTCTGTGAATCACTACCCCCCACAATTCAACAGGACAACATACAAAGGATTCACAATGGAAGGCACAAGCCCTGTCGCACTGGTTGCCACCTACGGAAGTGCCATTCTGGTGGTTCAAGCCTATGATCGGGACTTTCGAGATGGAGTGAATCCCAAGATCTATTACTCACTGAAGCCAAAGTCCAACAACACTAGGCTCTATCAGATCACACAGGAGGGATTTCTAATTGCCAAAACCAATCAACTGCGGGCATTTGAGAAACACTTCTTGGAGTTCCATCAAGCCCCTTCAGTGGAAGAGACAAGCTGTACGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012852 True 1356 mRNA 0.44 12 10644390 10656133

Neighbor

gene id symbol gene type direction distance location
AMCG00012853 NA coding downstream 3 10641718 ~ 10644387 (-)
AMCG00012854 NA coding downstream 13436 10630026 ~ 10630954 (-)
AMCG00012851 NA coding downstream 18115 10612609 ~ 10626275 (-)
AMCG00012846 NA coding downstream 69881 10567431 ~ 10574509 (-)
AMCG00012847 NA coding downstream 87692 10552425 ~ 10556698 (-)
AMCG00012857 atp6v1f,LOC101079638,LOC101164034,LOC104938441 coding upstream 164126 10820259 ~ 10822853 (-)
AMCG00012861 NA coding upstream 286707 10942840 ~ 10979099 (-)
AMCG00012867 st7,LOC106573121,LOC106530896 coding upstream 351800 11007933 ~ 11030339 (-)
AMCG00012868 capza2 coding upstream 411017 11067150 ~ 11084825 (-)
AMCG00012869 NA coding upstream 440352 11096485 ~ 11120770 (-)
G40266 calu,LOC102225510,LOC105939814 non-coding downstream 93013 10549657 ~ 10551377 (-)
G40206 LOC101154678 non-coding downstream 418433 10225694 ~ 10225957 (-)
G40172 NA non-coding downstream 953479 9686810 ~ 9690911 (-)
G40115 NA non-coding downstream 1386939 9236900 ~ 9257451 (-)
G40039 NA non-coding downstream 1558597 9083660 ~ 9085793 (-)
G40323 NA non-coding upstream 72362 10728495 ~ 10728820 (-)
G40325 NA non-coding upstream 81849 10737982 ~ 10738597 (-)
G40326 NA non-coding upstream 82952 10739085 ~ 10739378 (-)
G40327 kcp,si:dkey-266m15.6,LOC107564914 non-coding upstream 83762 10739895 ~ 10740301 (-)
G40584 NA non-coding upstream 1581096 12237229 ~ 12239457 (-)
AMCG00012829 NA other downstream 1491985 9112441 ~ 9152405 (-)
AMCG00012782 NA other downstream 2739935 7891489 ~ 7904455 (-)
AMCG00012751 NA other downstream 3948466 6638480 ~ 6695924 (-)
G39487 NA other downstream 4188212 6455721 ~ 6456178 (-)
AMCG00012732 NA other downstream 4580573 6052364 ~ 6063817 (-)
AMCG00012858 NA other upstream 84221 10740354 ~ 10753698 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other upstream 201748 10857881 ~ 10862322 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 1584263 12240396 ~ 12271789 (-)
AMCG00012906 kin other upstream 2240387 12896520 ~ 12906333 (-)
G40778 LOC107575789 other upstream 2458760 13114893 ~ 13115487 (-)

Expression


Co-expression Network