AMCG00012853


Basic Information

Item Value
gene id AMCG00012853
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 10641718 ~ 10644387 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012853
ATGGACATGAACGTGCTTGGAGGAAGCATGGGAGTTGCCCTACTTCTCCTGATTATCGCGTTGTTCGTGTTTCTTCGAATTGCAAAGAAACGAAGGCAGCATCAACACACTGCAGACAGGGCCTCTGTGGCAGGAGAAAAACACCCGAATGTGGTTAACCCTGGAAGATCTGTGCCTCTGGTGGAGGAAATCGCATATCACAATGAAGGATACAGTGACTTGGGTGAAGATGAAGCCACCTCCAATGCGCATAGAAAACATGGGCTTTATATTAAGAAGGATGAAAAGACAGAAGTGAATGCCTATACCAAAGAAAACGCCATTCTGAACATTTCCAGTGATACAGTGCAGCCACAGATAAGGCCTGAACAAGAATCAGAAGCTGTGTCACAATTGATTATGTCCAATGGAAAAACGGTGGAAAGATCCAGCAATAAATCTGTTTGGTTTCAGGATGAAGCTATACCAAACGAAAATGATTCCAGCACCAACCAAAATGCAGAAGTCCAAGCTGAAGTAGTTCAGCCAAAAGAGGTGCAGACAAATGTCCAGATAGATGTTGTCACCCCTTCATCACAAGATCAATATGGTGACAAGGAAGCTGACATTAAAGATGAATACAATGCTGGAACCAATCCCAATGATGACCTGCCCTTGGAAGGCCCGCATTCAAGTAGAACAGAAACTGAGGCAGCAAACCTTTTCCAATATGAGAACCTTTCTGCTCAAAACGAACTGGTATCATCAACAGACGACGATAAGGTGAAAGACGACAACTCACAGAATCAGGACTGTGACAGCACCGCACAGACGGGGCTTATGTTTTTCGTAGAGGATTCTAtagaattttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012853 True 852 mRNA 0.44 3 10641718 10644387

Neighbor

gene id symbol gene type direction distance location
AMCG00012854 NA coding downstream 10764 10630026 ~ 10630954 (-)
AMCG00012851 NA coding downstream 15443 10612609 ~ 10626275 (-)
AMCG00012846 NA coding downstream 67209 10567431 ~ 10574509 (-)
AMCG00012847 NA coding downstream 85020 10552425 ~ 10556698 (-)
AMCG00012845 impdh1,LOC108442450,LOC107559456,LOC107665545,LOC106561215,LOC107710381 coding downstream 115830 10493362 ~ 10525888 (-)
AMCG00012852 NA coding upstream 3 10644390 ~ 10656133 (-)
AMCG00012857 atp6v1f,LOC101079638,LOC101164034,LOC104938441 coding upstream 175872 10820259 ~ 10822853 (-)
AMCG00012861 NA coding upstream 298453 10942840 ~ 10979099 (-)
AMCG00012867 st7,LOC106573121,LOC106530896 coding upstream 363546 11007933 ~ 11030339 (-)
AMCG00012868 capza2 coding upstream 422763 11067150 ~ 11084825 (-)
G40266 calu,LOC102225510,LOC105939814 non-coding downstream 90341 10549657 ~ 10551377 (-)
G40206 LOC101154678 non-coding downstream 415761 10225694 ~ 10225957 (-)
G40172 NA non-coding downstream 950807 9686810 ~ 9690911 (-)
G40115 NA non-coding downstream 1384267 9236900 ~ 9257451 (-)
G40039 NA non-coding downstream 1555925 9083660 ~ 9085793 (-)
G40323 NA non-coding upstream 84108 10728495 ~ 10728820 (-)
G40325 NA non-coding upstream 93595 10737982 ~ 10738597 (-)
G40326 NA non-coding upstream 94698 10739085 ~ 10739378 (-)
G40327 kcp,si:dkey-266m15.6,LOC107564914 non-coding upstream 95508 10739895 ~ 10740301 (-)
G40584 NA non-coding upstream 1592842 12237229 ~ 12239457 (-)
AMCG00012829 NA other downstream 1489313 9112441 ~ 9152405 (-)
AMCG00012782 NA other downstream 2737263 7891489 ~ 7904455 (-)
AMCG00012751 NA other downstream 3945794 6638480 ~ 6695924 (-)
G39487 NA other downstream 4185540 6455721 ~ 6456178 (-)
AMCG00012732 NA other downstream 4577901 6052364 ~ 6063817 (-)
AMCG00012858 NA other upstream 95967 10740354 ~ 10753698 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other upstream 213494 10857881 ~ 10862322 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 1596009 12240396 ~ 12271789 (-)
AMCG00012906 kin other upstream 2252133 12896520 ~ 12906333 (-)
G40778 LOC107575789 other upstream 2470506 13114893 ~ 13115487 (-)

Expression


Co-expression Network