AMCG00012865


Basic Information

Item Value
gene id AMCG00012865
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 10978883 ~ 10998312 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012865
caaagaagcaaACACACTCCTCACCCACCTCGCTGTTGCATAGCACGGACGGTTTGGGCCCTCCGGCTATCCATAGGCGCCTCGTCCTCACGGCTGCTCCCGCAGGCGCAGAAGGACCGCCATGCTTTACGATGGCGGCAACGCGTTCCCGGCCGGGGATGAGAGCGACGGCAGCGAGGACGAGTGGGATCTTGAATATGGCTCCAGTCGAAAGCATGAGagaCTCCCTGTTTCTATACCTGCTGAAGATCAAATTTCATCCTATAAAAGGGCCATACAATCTGGTATGGATGTGGACTCCAGACTGGGGTTTGAATGGACTCCCCTGATGTGTGCTGCCCACGTAGCCAATTATGAACTGGCACAGATTCTTTTAGACAGGGGAGCTAATGCCAACTTCAGTAAAGAAGTAAATGCCCAGGATGTTAATGGATATACTgcCCTAATGTTTGCGGTTCAGTATGCAAGAGAGACAGCTGTGCTAAAGCTGCTTGAACTGGGTGCAAACCGGACGCTACGAACAAAGGATGGGAAGAGCGCAGCTGAGATCGCACAAGCGCACAAACGTTTTCAGATTGCTCGAATTCTTGCTGCATCACAAAATCACTTGGGAGATGAACTTGTATCTAAAGAGGAGACACTCTACAGGTTTTTCAAGAGAAATCCAGACCCAATCCCTACTTCTAATGAAAGTGCCTCTAAACTTGTCGACATTGAAGTTCTGCTGCATGGCCTTAACCTGGAACACCTCACAGATATCATGCTGATTGGCATTACAGATCTGGAAGACCAGAAGAAAATTATGTCTGCAATTCAGGAGATTCAGTTGGATAAGGCAGACCTCCGAAAGTTCACAGAGCTGGGAAATTTTGATTGCAGcagCACAGAACTGTACAATTACCTCATCAGTCTGCGCCAGCAATGCTGCTACTTGACGGAGACGGTTCAGGATGTCATTAACAAATTGCCAAAACGTTCCTGTGAGCTAGTGCTCGCATGGGATCCGCAGATGGAGTCGCAGTCTCTCTGTGAAGAGCTGGTGCTGCAGACAGGGGACTTGCATAAAGAGGTGACCTGCTTACGCAACCTGCTGGACAAGATGAATCATACAGAAGACCCCTGTCGGCTGCCTAGTGCTGCTGTTGGTAGGAAATTCTTGAAAGGCCTAGCAGTTGCACTGTGTGGAATCGGATTACTGTTTCTTTATGCAGaaCCAAAAAGATTTGTGCAGTCAAACAATGCAGAAGAGGGAAAGATTACTTTTTCCGCCTATTAGTATTACAATTGGAAACAGTTGTGGCTATTcttgtttattaatgttattattgctgtttttaggtttcattttttgattgtttcatattcatttcAGAAACAAGGATTTAACTGGTTAGTTAAACATGTACATGGCCAGTTTCACTGGTGAATTCTGTGTTCTGACATTTGTTAAACATTTGTTCTGTTCTGCAATTATGTTAAACCTGTAGTGatgacataaataaatggcaaatgCAGCTCAA

Function

GO: NA

KEGG:

id description
K18410 ASZ1, GASZ; ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012865 True 1520 mRNA 0.46 12 10978883 10998312

Neighbor

gene id symbol gene type direction distance location
AMCG00012863 NA coding upstream 31613 10913292 ~ 10947270 (+)
AMCG00012862 cttnbp2,LOC102784586,LOC102201476 coding upstream 96258 10874552 ~ 10882625 (+)
AMCG00012866 NA coding upstream 116583 10825020 ~ 10862300 (+)
AMCG00012855 NA coding upstream 238762 10699041 ~ 10740121 (+)
AMCG00012860 NA coding upstream 289079 10686553 ~ 10689804 (+)
AMCG00012864 NA coding downstream 1889 11000201 ~ 11006579 (+)
AMCG00012871 NA coding downstream 213710 11212022 ~ 11232862 (+)
AMCG00012870 mest coding downstream 245113 11243425 ~ 11248941 (+)
AMCG00012876 NA coding downstream 431654 11429966 ~ 11433519 (+)
AMCG00012884 NA coding downstream 634060 11632372 ~ 11770268 (+)
G40303 NA non-coding upstream 235779 10740432 ~ 10743104 (+)
G40214 NA non-coding upstream 554512 10375031 ~ 10424371 (+)
G40203 NA non-coding upstream 806420 10172254 ~ 10172463 (+)
G40146 NA non-coding upstream 1504663 9473973 ~ 9474220 (+)
G40145 NA non-coding upstream 1505015 9473545 ~ 9473868 (+)
G40436 NA non-coding downstream 105513 11103825 ~ 11159087 (+)
G40496 LOC103376870 non-coding downstream 295905 11294217 ~ 11354359 (+)
G40498 NA non-coding downstream 406693 11405005 ~ 11405356 (+)
G40497 exoc4,LOC107744930,LOC107725510,LOC107585070 non-coding downstream 467909 11466221 ~ 11468218 (+)
G40555 NA non-coding downstream 746284 11744596 ~ 11744795 (+)
AMCG00012848 NA other upstream 436923 10540728 ~ 10541960 (+)
G40224 NA other upstream 534436 10436907 ~ 10444447 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other upstream 1848672 9112460 ~ 9130211 (+)
AMCG00012818 NA other upstream 1893183 9083662 ~ 9085700 (+)
AMCG00012803 sult4a1,LOC102784496,LOC106576158 other upstream 2408992 8536233 ~ 8569891 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other downstream 1454927 12453239 ~ 12500402 (+)
G40629 NA other downstream 1490263 12488575 ~ 12535929 (+)
G40999 metap2,LOC108428789,LOC100194705 other downstream 3430001 14428313 ~ 14433201 (+)
AMCG00012940 LOC107748465 other downstream 3518471 14516783 ~ 14529806 (+)
G41059 NA other downstream 3634045 14632357 ~ 14633413 (+)

Expression


Co-expression Network