AMCG00012868 (capza2)


Basic Information

Item Value
gene id AMCG00012868
gene name capza2
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 11067150 ~ 11084825 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012868
AAAGATGGCGGATCACGAGGAGCAGTTATCTGATGAGGAGAAGgtacGCATAGCTGCCAACTTTGTTATTCATGCTCCTCCTGGAGAGTTCAATGAAGTTTTCAATGATGTGCGATTGCTGCTCAACAATGACAATCTTCTCAGGGAAGGTGCAGCTCAtGCATTTGCACAGTACAATGTGGACCAGTTTACTCCAGTGAAAATTGATGGGTACGAAGAGCAGGTCTTAATTACAGAACATGGTGATCTTGGAAATGGCAGAATTCTGGATCCAAAGAACAAGATCTCCTTCAAGTTCGACCATTTGCGGAAGGAGGCGAGCGAGCCACGCTCCCACGACGTGGACAGCGCTGTGGAGAGCTGGAGGGGTGCTGTGGACGGGGCAaTTTATGGGAAAACTATCGATGGACATCAAACTATCATTGTGTGTATCGAGAACGGACGCTGGAGGTCAGAATGGAAATTCACCATCAGCCCTTCAACAACCCAAGTAGCCGGAATTATGAAAATTcagGTTCACTACTATGAAGATGGGAATGTTCAGCTTGTGAGCCACAAGGACGTTCAGGAATCGATGTCTCTTTCTaATGAAGCTCAAACTGCGAAGGAGTTTATTAAGATCATCGAGGCTGCAGAAAATGAATACCAGACTGCCATTAACGAGAATTACCAGACGATGTCTGACACTACTTTCAAGGCCTTACGTCGACAGCTCCCAGTGACGCGCACCAAGATTGACTGGAACAAGATCCTGAGCTACAAGATAGGAAAAGAGATGCAGAACGCTTAAAATGAACCTTGCATGACTGGATTGTTGTTTTGTCcttgtataaattaaataaataaaaggtttggtctcacacaaaaaagtaaaacatttattaaacttaAGATGCCTACTTTTAATAAGACTTTTATACAGATGCCATTAAAACTTACTATATGCATTTGGAACTTACattgctaataaaaaaaaatattactttttttttttttgtaatgtaatcaTTTTTTCATGTGTAAGAGACTCCCTATTTTGTCACGCctacaatattttgtgttaGTGAGACCACACCTTTTAAAGGATcatgagaaaaagagaaatccCATTGACCTATTGAAatattcagattattttatgttatacCCAGTTTACGTGTAGTTTagaatttacttttttttttttttcttcaagaaaATAGGAATCTTCCAAAACATACTCATCTAATTTcttcaatgtgaaaaaaaaaacttattcATTGGCTCATATTTTTGTGTCATCCTTGCACAAGTCGTCACCCTCTTGACCACGCAACGTACTGTTATGTGTGTAAGTGTTCTTCATTGGATTCATTGAATAATTAAGAGCTTGCTGTTggaaacaagaaaataacaggTTATCATTCTAACTTGTgacatggggaaaaaatacaaactaaaaatcAGGACAGGCTTCATTAACAAGGTCTTTTGGTCTGTATCTTAATTCATCTTgctaaaaaacaagaacattgcTACTTAAAATGTGCTTATGTTTAGCTTCTTAAAAGACATTTGTATTACATGGGCCCCCTgagttcttatttttattaaacagacATGACTGTATTATAACGAGGCACATTGTAATATATACCTGTATTAAAAATCTTGTCTGTCAGTTTGGTGATTTATTTCCTCTTGGAATGAACTGTAATACAATCTCAATTATGTTGCATTAAATGACAGATTTTCTATTTAA

Function

symbol description
capza2 Predicted to enable actin filament binding activity. Predicted to be involved in actin cytoskeleton organization and barbed-end actin filament capping. Located in extracellular exosome.

NR:

description
PREDICTED: F-actin-capping protein subunit alpha-2

GO:

id name namespace
GO:0030036 actin cytoskeleton organization biological_process
GO:0008290 F-actin capping protein complex cellular_component
GO:0071203 WASH complex cellular_component
GO:0003779 actin binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012868 True 1741 mRNA 0.37 10 11067150 11084825

Neighbor

gene id symbol gene type direction distance location
AMCG00012867 st7,LOC106573121,LOC106530896 coding downstream 36811 11007933 ~ 11030339 (-)
AMCG00012861 NA coding downstream 88051 10942840 ~ 10979099 (-)
AMCG00012857 atp6v1f,LOC101079638,LOC101164034,LOC104938441 coding downstream 244297 10820259 ~ 10822853 (-)
AMCG00012852 NA coding downstream 411017 10644390 ~ 10656133 (-)
AMCG00012853 NA coding downstream 422763 10641718 ~ 10644387 (-)
AMCG00012869 NA coding upstream 11660 11096485 ~ 11120770 (-)
AMCG00012875 cav1,LOC106561554,LOC107574005,LOC107574842,LOC107679630 coding upstream 63467 11148292 ~ 11161963 (-)
AMCG00012873 tes coding upstream 121726 11206551 ~ 11228481 (-)
AMCG00012872 NA coding upstream 149121 11233946 ~ 11242870 (-)
AMCG00012874 copg2,LOC107744880 coding upstream 164293 11249118 ~ 11259131 (-)
G40327 kcp,si:dkey-266m15.6,LOC107564914 non-coding downstream 326849 10739895 ~ 10740301 (-)
G40326 NA non-coding downstream 327772 10739085 ~ 10739378 (-)
G40325 NA non-coding downstream 328553 10737982 ~ 10738597 (-)
G40323 NA non-coding downstream 338330 10728495 ~ 10728820 (-)
G40266 calu,LOC102225510,LOC105939814 non-coding downstream 515773 10549657 ~ 10551377 (-)
G40584 NA non-coding upstream 1152404 12237229 ~ 12239457 (-)
G40684 NA non-coding upstream 1498686 12583511 ~ 12583719 (-)
G40735 NA non-coding upstream 1656350 12741175 ~ 12742696 (-)
G40747 NA non-coding upstream 1822622 12907447 ~ 12911725 (-)
G40798 NA non-coding upstream 2384480 13469305 ~ 13558179 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 204828 10857881 ~ 10862322 (-)
AMCG00012858 NA other downstream 313452 10740354 ~ 10753698 (-)
AMCG00012829 NA other downstream 1914745 9112441 ~ 9152405 (-)
AMCG00012782 NA other downstream 3162695 7891489 ~ 7904455 (-)
AMCG00012751 NA other downstream 4371226 6638480 ~ 6695924 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 1155571 12240396 ~ 12271789 (-)
AMCG00012906 kin other upstream 1811695 12896520 ~ 12906333 (-)
G40778 LOC107575789 other upstream 2030068 13114893 ~ 13115487 (-)
AMCG00012931 snrpf other upstream 3255591 14340416 ~ 14344472 (-)
AMCG00012985 NA other upstream 4634688 15719513 ~ 15722457 (-)

Expression


Co-expression Network