AMCG00012873 (tes)


Basic Information

Item Value
gene id AMCG00012873
gene name tes
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 11206551 ~ 11228481 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012873
AGCTTGAGAACTTACCCCTCAAAGGTGGTCCGGCTGAAAACAGCCGCAAGAAGAGCAGTAAATACCAGCAGCACCTTCATTCTCGATGGAAAGAACAGAAGCAAGGAGCCCAAACCTCACGGAACTGGAGTTGAGTTGACTTTCTACATCCACGCAACGCGTCAAAACGCCGTCATGGAAGtggagaaagaaatgaaaaagATGACCTTGGGTCATGAAATCGGAGCCGGAGCCCCTTGCTTGAAATGCAAGGATAAATGCGAAGGTTTTGAGCTGCACTTCTGGAGGAAAATCTGTCGGAACTGCAAGTGTGGCCTGGAAGACCATGAGGTCCAGACCAGCTCTGCTGAGGACAAGAAGGTGGGCAAGCTGTTCGAGGACACCAAGTACACCACCCTCATCGCCAAGCTGAAGACTGATGGAGTGCCTACCTACCGACGCAGCGCGGTCACGCTCACCAACGCCATCACACCCACCAGCGCCTCCCCTGCCAAGAAAGATGTGGAAATTAAATCTGTGACCTATGAGTGGGCTCCACCCGTGGCCAATCAGAGTCTGGCCATGCGCTATATCGAGCTGCTGCCCAAGGAGAAGCAGCCTGTGGCAGGTTCAGAGGGGGCAGCCTACCGCAAGAAACAGATGGCCAAGCAACTGCCTGAGCATGATCAGGACCCCTCCAAATGCCACGAATTGTCCACTAATGAGGTGAAGCAGATGCAGCAGTATGTGAAGAAGTACAAGGAGGAAGCCCTGGGGGTCGGAGACATCAAACTTCCAGGAGAGATGGAGGCACAGGCAAGGGAGAGGGATCCGAGTCAATCCGGGGACCGGAGCACCACAGCGTCTGTGGGAGCGCTGGGGGATAAGGCCACACCCGCGAAAGGAGCCGCCTATGCCTGCCACCACTGCCAGTTGGTCATGAAGGAGGGTGACCCCGCAGTGTACGCAGAGCGCGCTGGCTACGACAAACTCTGGCACCCCGCCTGCTTCGTTTGCACTACCTGCTCCGAGTTGCTGGTGGACATGATCTACTTCTGGAAGAAGGGAAAGCTGTTCTGCGGGCGGCATTATGGTGACAGCGAGAAGCCTCGATGCGGGGGCTGTGACGAGCTGATCTTCAGCAATGAGTACACGCAGGCAGAGGGCCAGAACTGGCACCTGAAGCACTTCTGCTGCTTCGACTGCGACTGCGTCCTGGCGGGAGAGACCTACGTCATGGTGAACGACAAGCCTGTGTGCAGACCCTGCTACATCAAGAGCCATGCTGTGCTCTGCCGCAGCTGCAACAACACCGTGGACCCCGAGGCTCAGAGGGTCACCTACGGAGAATTCAACTGGCATGCCGAGCCGGGCTGCTTCCAGTGCTCCTGCTGCTCCAAGTGTCTGATTGGCCAGCGCTTCATGGCGGTCCAGGGGATGCTCTTCTGCTCAGTTGagtgtaaaaagaaaaccatgtcgtaaaataaagaaataagaaatcagTGGTAGCTGATCAGAAATTATAGACACCGCGGATAACGATCAACTGAAGATTTCATGAAAACATAAGGTTTTGCTACCAGGCTTTCCCTTTCATTAGTGGAGAGACTGAGGGTAAAACATCTAAATCTAAATGCTCACTTTAAGTcactttcctgttttttttttaatctgtagtGATACTACTGAATTTAATTCTAAACAAACCTGCTTCGATAAACTCTAGTCCCCATTCCTGCTTAAGTTTGATCTTGTCAGTATTATTCCCCTTTGAAGGAAAAGGTAAACTAACAGTGCAAAGGGATAAGACTATGGTAGTGCCAGTATATGCTTCAATCCAAGTAAGGTCACTTTGGGACTGGTGCTTAATTACCCAAGCAGTTCATGAATGGCTTATTAAACTTAGCAGagatttaattttcattgcAGATCCATTAAGTGCCATTACATATACACTTTGTGTGATTAATCGCACTTTACTGTTCTCTGAATGCACTCTATAACCTTAATAAATTTGATAAATTTGGGCAATggctttttgatttgtttttttggtgttttcttgACAGTATGTTCTCTTAAAACATATTATACATGGTCAGTTCTAACATGGAAATCTTGCACACAATTCAAGGAAGCCCCACTAAAGTAACGGCTATTGTCTGTGATGGCGTCGACCCAAACTGACCAAATAATTTCCACTGCCTCACTGTTTTGACTAACAACCTTATATAACGTTTGGTGTCCGATTACTGCCACTTTCGTCTTtggctataaaaaaaaatctacctgGAAATGTTCTGGGGACACCCTGCTTTGATGCAATATGTCAAGCCAGTGCTGAACTGTTTTCTTTGTGGAAATAAAACTAATCAACCTCTGGTGTAATAATGGTGGGGGGTGGCAGCAGTTTGTGTTTTAGTGAGA

Function

symbol description
tes Predicted to enable zinc ion binding activity. Predicted to act upstream of or within regulation of cell population proliferation. Predicted to be located in cytoplasm and focal adhesion. Orthologous to human TES (testin LIM domain protein).

NR:

description
PREDICTED: testin

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K24270 TES; testin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012873 True 2406 mRNA 0.49 8 11206551 11228481

Neighbor

gene id symbol gene type direction distance location
AMCG00012875 cav1,LOC106561554,LOC107574005,LOC107574842,LOC107679630 coding downstream 44588 11148292 ~ 11161963 (-)
AMCG00012869 NA coding downstream 85781 11096485 ~ 11120770 (-)
AMCG00012868 capza2 coding downstream 121726 11067150 ~ 11084825 (-)
AMCG00012867 st7,LOC106573121,LOC106530896 coding downstream 176212 11007933 ~ 11030339 (-)
AMCG00012861 NA coding downstream 227452 10942840 ~ 10979099 (-)
AMCG00012872 NA coding upstream 5465 11233946 ~ 11242870 (-)
AMCG00012874 copg2,LOC107744880 coding upstream 20637 11249118 ~ 11259131 (-)
AMCG00012881 NA coding upstream 35176 11263657 ~ 11264562 (-)
AMCG00012880 NA coding upstream 136533 11365014 ~ 11386073 (-)
AMCG00012882 NA coding upstream 196852 11425333 ~ 11427587 (-)
G40327 kcp,si:dkey-266m15.6,LOC107564914 non-coding downstream 466250 10739895 ~ 10740301 (-)
G40326 NA non-coding downstream 467173 10739085 ~ 10739378 (-)
G40325 NA non-coding downstream 467954 10737982 ~ 10738597 (-)
G40323 NA non-coding downstream 477731 10728495 ~ 10728820 (-)
G40266 calu,LOC102225510,LOC105939814 non-coding downstream 655174 10549657 ~ 10551377 (-)
G40584 NA non-coding upstream 1008748 12237229 ~ 12239457 (-)
G40684 NA non-coding upstream 1355030 12583511 ~ 12583719 (-)
G40735 NA non-coding upstream 1512694 12741175 ~ 12742696 (-)
G40747 NA non-coding upstream 1678966 12907447 ~ 12911725 (-)
G40798 NA non-coding upstream 2240824 13469305 ~ 13558179 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 344229 10857881 ~ 10862322 (-)
AMCG00012858 NA other downstream 452853 10740354 ~ 10753698 (-)
AMCG00012829 NA other downstream 2054146 9112441 ~ 9152405 (-)
AMCG00012782 NA other downstream 3302096 7891489 ~ 7904455 (-)
AMCG00012751 NA other downstream 4510627 6638480 ~ 6695924 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 1011915 12240396 ~ 12271789 (-)
AMCG00012906 kin other upstream 1668039 12896520 ~ 12906333 (-)
G40778 LOC107575789 other upstream 1886412 13114893 ~ 13115487 (-)
AMCG00012931 snrpf other upstream 3111935 14340416 ~ 14344472 (-)
AMCG00012985 NA other upstream 4491032 15719513 ~ 15722457 (-)

Expression


Co-expression Network