AMCG00012881


Basic Information

Item Value
gene id AMCG00012881
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 11263657 ~ 11264562 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012881
ATGATTGCGGGAATGGGTGCCTTTTACATGCCAAGCCAATGTGAGcAGGACACCATGATGTCTTACATGAAAACCCTGCTTCTGTTCGCAATAATGTGTGCTCCCACAAGCAGCCTCTGTTACAGACTGTATCAAAGTGAATCCAGCTTCCTCTGCAACAACGAAATCCTCTCTGGGGCAAAGAAAAGCGACCCCCAGGACAGCTCCctgccagagagagggagactctTCTACCTGCCTGGGGAGGGTCTTTCGTCTGcagaagacagagaaaaaaggACGTTCCCTGCTTCACACTACAAATACCTGCGTCAGACCCAGCTAAAGGGGAAGATGTACCAGAATAGTGCCAAAAGTGACCGCCGGACAAAATTCACCTTGTCCCTCGATGTTCCCACCAATATCATGAACATCCTTTTCAACATCGCTAAAGCTAAAAACTTACGAGCAAAGGCTGCTGCCAATGCTCGACTAATGGCTCAAATTGGCCGaaggaagtaaataaatatttttaaatggctgtgTTCAGTCtggttagtttttttattttattttatatcatatttaatttagtttgtgcTACAgtgtagatttaaataaatctcaatGCTTATTCTAAGCAATACTGGATCCAGCAGTACATGTCTGACTTTAagttttttactttcttttttttccctttttgctgGTATTGGTGTCTCTGTGTTCAttgcttttcaaatgatttaatgattaataaattattaaaagaaa

Function

GO: NA

KEGG:

id description
K05257 UCN2_3; urocortin 2/3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012881 True 753 mRNA 0.41 2 11263657 11264562

Neighbor

gene id symbol gene type direction distance location
AMCG00012874 copg2,LOC107744880 coding downstream 4526 11249118 ~ 11259131 (-)
AMCG00012872 NA coding downstream 20787 11233946 ~ 11242870 (-)
AMCG00012873 tes coding downstream 35176 11206551 ~ 11228481 (-)
AMCG00012875 cav1,LOC106561554,LOC107574005,LOC107574842,LOC107679630 coding downstream 101694 11148292 ~ 11161963 (-)
AMCG00012869 NA coding downstream 142887 11096485 ~ 11120770 (-)
AMCG00012880 NA coding upstream 100452 11365014 ~ 11386073 (-)
AMCG00012882 NA coding upstream 160771 11425333 ~ 11427587 (-)
AMCG00012878 NA coding upstream 171450 11436012 ~ 11462738 (-)
AMCG00012877 exoc4,LOC107555552,LOC107744930,LOC107725510,LOC107585070,LOC107676929 coding upstream 219449 11484011 ~ 11503534 (-)
AMCG00012879 exoc4,LOC106609608 coding upstream 333404 11597966 ~ 11639025 (-)
G40327 kcp,si:dkey-266m15.6,LOC107564914 non-coding downstream 523356 10739895 ~ 10740301 (-)
G40326 NA non-coding downstream 524279 10739085 ~ 10739378 (-)
G40325 NA non-coding downstream 525060 10737982 ~ 10738597 (-)
G40323 NA non-coding downstream 534837 10728495 ~ 10728820 (-)
G40266 calu,LOC102225510,LOC105939814 non-coding downstream 712280 10549657 ~ 10551377 (-)
G40584 NA non-coding upstream 972667 12237229 ~ 12239457 (-)
G40684 NA non-coding upstream 1318949 12583511 ~ 12583719 (-)
G40735 NA non-coding upstream 1476613 12741175 ~ 12742696 (-)
G40747 NA non-coding upstream 1642885 12907447 ~ 12911725 (-)
G40798 NA non-coding upstream 2204743 13469305 ~ 13558179 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 401335 10857881 ~ 10862322 (-)
AMCG00012858 NA other downstream 509959 10740354 ~ 10753698 (-)
AMCG00012829 NA other downstream 2111252 9112441 ~ 9152405 (-)
AMCG00012782 NA other downstream 3359202 7891489 ~ 7904455 (-)
AMCG00012751 NA other downstream 4567733 6638480 ~ 6695924 (-)
AMCG00012888 mkln1,LOC107104017 other upstream 975834 12240396 ~ 12271789 (-)
AMCG00012906 kin other upstream 1631958 12896520 ~ 12906333 (-)
G40778 LOC107575789 other upstream 1850331 13114893 ~ 13115487 (-)
AMCG00012931 snrpf other upstream 3075854 14340416 ~ 14344472 (-)
AMCG00012985 NA other upstream 4454951 15719513 ~ 15722457 (-)

Expression


Co-expression Network