AMCG00012900


Basic Information

Item Value
gene id AMCG00012900
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 12840241 ~ 12867057 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012900
ATGGATCTGAACAACAAAGTCAGCAGTTTTTCCTTGGCCAAAAGCATCTTTGACAGCAGCCTGTTTGTCATTTCCAATATGACTGATCTGACCAAGGCAAAGCCCCAAGGATGCGATAACGGGGCTCTTCTGGACAGATTCGGGGTTTTAATCCAGGCTCTGCTTGCGGTTGTTGCCTTCAGCACTTTGATGTTAATGCGGTTTTATGACACATCTAAGCAGGCTATTGGAGCGCTCTTCATTCACTTTGCCAATGTTTTCCTGTCGAACCTCACCGAGCAGGATCCTTGCTCTCTATACTTAATGAACTTCCTGTTGGATGCCACTCTTGGGATGCTTCTGATCTGGCTTGCTGTGAAAGTCATCTCACGAATAGTggaatacaaacaatacactttaCTTATGTTTGGGGAATATGGTGACCCCCCCCAGGCGGCGGCTTGGATTGGCCAGTGTGCCGTCTACATGCTCATCATGGTCTTCGAGAAGACCGTTGTCAGTTTGGTGCTGCTCATTCCCGGCTGGACCAAACTTCAAGAAGTTTTGCTGGACTACATCCCCAACCCACAGCTGGAGCTTGTGTTGGTCATGCTAATCGTTCCCTTCATTGTCAATGCCATAATGTTCTGGGTTGTGGACAGTTTGATGATGCGTAAATATAAGAACCAGCAGACCGCCGAGAGCCCAGCAAACATCAAATCGACAGCAGCCTCAAAGGGGACGGGTGATGAGGAGTCACAGGTACTGCTGACTGCTGATGATGACGTAGATCCATCAGAAAGCGAGAATGACGGAGGAGACGTGAAGTGTGATGCAGACcagacagagaaaataaatgctacAAGCTGTCATATCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012900 True 858 mRNA 0.48 8 12840241 12867057

Neighbor

gene id symbol gene type direction distance location
AMCG00012897 NA coding upstream 212664 12618767 ~ 12627577 (+)
AMCG00012896 LOC107580939 coding upstream 231040 12593885 ~ 12609201 (+)
AMCG00012895 NA coding upstream 287171 12517928 ~ 12553070 (+)
AMCG00012893 NA coding upstream 325343 12508984 ~ 12514898 (+)
AMCG00012892 LOC103383002,LOC106525804 coding upstream 448136 12383058 ~ 12392105 (+)
AMCG00012904 NA coding downstream 17432 12884489 ~ 12901327 (+)
AMCG00012905 atp5c1,LOC107748457,LOC107675979,LOC107555824 coding downstream 39328 12906385 ~ 12916433 (+)
AMCG00012903 taf3 coding downstream 93291 12960348 ~ 12976980 (+)
AMCG00012908 gata3 coding downstream 127533 12994590 ~ 13014587 (+)
AMCG00012910 celf2,LOC106927059,LOC103382440,LOC107092344,LOC106576215,LOC106609337 coding downstream 847265 13714322 ~ 13743896 (+)
G40710 NA non-coding upstream 97547 12741174 ~ 12742694 (+)
G40643 NA non-coding upstream 318422 12521463 ~ 12521819 (+)
G40604 NA non-coding upstream 488513 12350850 ~ 12351728 (+)
G40571 NA non-coding upstream 645555 12194485 ~ 12194686 (+)
G40555 NA non-coding upstream 1095446 11744596 ~ 11744795 (+)
G40776 LOC107575789 non-coding downstream 247836 13114893 ~ 13115253 (+)
G40777 NA non-coding downstream 248255 13115312 ~ 13115532 (+)
G40788 LOC107575789 non-coding downstream 393587 13260644 ~ 13261179 (+)
G40824 NA non-coding downstream 1016204 13883261 ~ 13885189 (+)
G40846 NA non-coding downstream 1119893 13986950 ~ 13988088 (+)
G40629 NA other upstream 304312 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 339839 12453239 ~ 12500402 (+)
AMCG00012848 NA other upstream 2298281 10540728 ~ 10541960 (+)
G40224 NA other upstream 2395794 10436907 ~ 10444447 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other upstream 3710030 9112460 ~ 9130211 (+)
G40999 metap2,LOC108428789,LOC100194705 other downstream 1561256 14428313 ~ 14433201 (+)
AMCG00012940 LOC107748465 other downstream 1649726 14516783 ~ 14529806 (+)
G41059 NA other downstream 1765300 14632357 ~ 14633413 (+)
AMCG00012954 NA other downstream 2214362 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 2430905 15297962 ~ 15317344 (+)

Expression


Co-expression Network