AMCG00012918 (cdc123,LOC106576189)


Basic Information

Item Value
gene id AMCG00012918
gene name cdc123,LOC106576189
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 13978548 ~ 13989776 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012918
ATGAAGAAAGAGCAAGTAGTAAACTCGCAGTTTTCGGTCTGGTACCCGTTATTCAAGAAGCACACGATTAAAAGTTTGATTCTTCCCTTGCCTCAGAATGTGATCGATTACCTGCTGGATGACGGGACTCTAGTAGTTTCCGGGAGAGAAGAGCCCCCGCAGAATTCTCAGCCAAACAACAACGACTCTGATGAGGAGGAAGATGTACAGtGGTCAGACGATGAGACTACAACAACTGTCACAgcTCCTGAATTTCCAGAGTTCAATTCCAAAGTCCAAGAAGCAATCAATGCCCTCGGCGGCAGTGTCTTCCCAAAGATGAACTGGAGTGCTCCAAGGGATGCCAACTGGATCGCAATGAACAGTTCTCTACAGTGCCAGAGCCTGAGTGACATTTTCCTGCTGTTCAAGAGCTCAGACTTCATCACTCATGACTTCACTCAGCCgtTCCTTCGCTGCAACGATGACTCCCCAGACCCATTGATAACCTATGAGcttGTCTTGAGGAAATGGTGCGAACTAATCCCTGGCGGGGAGTTCCGGTGCTTCGTCAAGGAAAACAAGCTGATAGGAATCTCGCAGAGGGACTACACACAGCACTATGACCATGTTTCAAAGCAGGAAGAGGACATTTCCAGATCCCTCCAGGATTTCTTCAAGGACAACATTCAGTACAAGTTTCTGGATGAGGACTTCGTTTTTGATGTCTACAGAGATAGTCAGGGCCGAGTGTGGCTGATAGATCTGAATCCCTTTGGTGAGGTGACCGACTCATTGTTGTTTACATGGGAAGAACTAACCTCAGGACACCGTCTCAGGGGGGACCATGTTGAGGGGGACACTACAGAGCAGGATTCTCCAGCTTTCCGTTACACCACCAGTGAAGTGACTGTGCAACCCAGCCCCTGCCTCAGCTACCGGATTCCCCGGGACTTTGTGGACCTGTCCACTGGGGAGGACGTGTACAAGCTCATTGACTTCCTCAAGCTGaaaaaaagtcaGCAAGAGGAATCAGACGAGGAATGTTAG

Function

symbol description
cdc123 Predicted to act upstream of or within cell division. Predicted to be active in cytoplasm. Orthologous to human CDC123 (cell division cycle 123).

NR:

description
PREDICTED: cell division cycle protein 123 homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012918 True 1029 mRNA 0.49 14 13978548 13989776

Neighbor

gene id symbol gene type direction distance location
AMCG00012915 sec61a1,LOC107748391,LOC107667387,LOC108271933,LOC103358725 coding upstream 18333 13954086 ~ 13960215 (+)
AMCG00012914 dhtkd1,LOC107569696,LOC104963732,LOC107740898 coding upstream 25701 13940426 ~ 13952847 (+)
AMCG00012913 NA coding upstream 74403 13894668 ~ 13904145 (+)
AMCG00012916 echdc3,LOC106576218,LOC106609342 coding upstream 86983 13889708 ~ 13891565 (+)
AMCG00012912 NA coding upstream 96342 13863807 ~ 13882206 (+)
AMCG00012920 NA coding downstream 52483 14042259 ~ 14061913 (+)
AMCG00012921 camk1d coding downstream 88548 14078324 ~ 14102726 (+)
AMCG00012923 NA coding downstream 156711 14146487 ~ 14152861 (+)
AMCG00012922 NA coding downstream 173891 14163667 ~ 14175623 (+)
AMCG00012926 cdk17,LOC107658862,LOC107656329 coding downstream 238862 14228638 ~ 14259163 (+)
G40824 NA non-coding upstream 93359 13883261 ~ 13885189 (+)
G40788 LOC107575789 non-coding upstream 717369 13260644 ~ 13261179 (+)
G40777 NA non-coding upstream 863016 13115312 ~ 13115532 (+)
G40776 LOC107575789 non-coding upstream 863295 13114893 ~ 13115253 (+)
G40710 NA non-coding upstream 1235854 12741174 ~ 12742694 (+)
G40920 NA non-coding downstream 195464 14185240 ~ 14186136 (+)
G40963 NA non-coding downstream 351170 14340946 ~ 14344481 (+)
G40986 NA non-coding downstream 405800 14395576 ~ 14395899 (+)
G40989 NA non-coding downstream 407821 14397597 ~ 14397855 (+)
G41054 NA non-coding downstream 635476 14625252 ~ 14625850 (+)
G40629 NA other upstream 1442619 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 1478146 12453239 ~ 12500402 (+)
AMCG00012848 NA other upstream 3436588 10540728 ~ 10541960 (+)
G40224 NA other upstream 3534101 10436907 ~ 10444447 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other upstream 4848337 9112460 ~ 9130211 (+)
G40999 metap2,LOC108428789,LOC100194705 other downstream 438537 14428313 ~ 14433201 (+)
AMCG00012940 LOC107748465 other downstream 527007 14516783 ~ 14529806 (+)
G41059 NA other downstream 642581 14632357 ~ 14633413 (+)
AMCG00012954 NA other downstream 1091643 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 1308186 15297962 ~ 15317344 (+)

Expression


Co-expression Network