AMCG00012928


Basic Information

Item Value
gene id AMCG00012928
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14332782 ~ 14340902 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012928
CAGGAACACATTGTGTAGGAAGCGAAAAGCAGTAACGTTTTGGAAATCAAACATGGCAAAGTTTCAGTCACACGTCTTGAAGTCACCTCTGAGTGATACGGCTCGCATTACCGGCCCAAAGACCAGACTCACGCAAACTGCGCAAATCCCCGCAACGAGCAGGCCGGATTCAGTGGTACTCCGTCTCGGTGACGCGGGACACGACGGCGGCGCTGGAGCGGAGCTGTGCGGAGCAGCGGCGCCGGCTCAGCCTGGCCGGACAGCGGGCGGAGGAGGATGCAGCGGCGCTGGAGGACTTTGAGAAGGAAAATGAGCACAAAGCGGTGCAGGCCGTTCAAGACGCAGAGAACGAAACTCTGAGGAAGTTAGAACTGATGGCCGAAATTAAGAGCGCAACAGCTAAAATGATGGCAGTTAAAAGTGACATTGCGAGGAAGCAGCAGATCTTCAGTAAGTACTTGGTTTATAAGACATTTTTGACAAACCTGTGCCCCCCGGAGTGGAAAGCAgagcaggaaagaaaaaaagagcgGGCCAGGGAGGctaaaaggaaagagagagaggggggcaaAGACAAGCCTGTGCGACTGCCACCGCTGTCCTCGAAAGACCACAAGTCCCCAGCTCTCTTGCAAAGACAGTCAAAAGTCACCAAGGTATCCACAGTGACGCGTCCCAGCAACACCCCAGCGACACGGACACCCCAGAGTACTAGCAAGCCACTGGATAAGTCAACTGATAAGGAGCCTTCCACGGACGAGAGTGAGAGTGAAGAGgagGCCGAGATGTATTTCACAGATCCGAATCAGatgataaacattttaaaagagctGGAAGATAAAAATCTGTCTTGCATACAAAACTTTCAAGAAACAGAAGAAGAGCTGGATGAAATCCACAAATCAGTGAAGACGACACAGGATAAAGTGAAACGTGAGACAGAAATGTTAGAGCAGCAGATAGAGATGCTTAACGCTGCAATCGCGAGAGAAAAGGAGAAGGCATCTGAACTGGAACTGAAATCCAGGATGTTTTCCTTTGGGGAATTTAATGAAGAGAAACAGGATCACATGCTCAAAATGTTAAACAGACGAGTGGAGGCCGTGTACCGGACGTGCATCGGAGACGCGGACGGGAAGATCAGCACTCTGCACATGCTGACAAGCATAGAGACCAGGATAGAGGAGCTCTTGGAGTGTTTGGATACGCTGCCGAGAGAGAAAGTGAACTATGCCAAACGCAACAGGGAAAAGGAACGGCGACTGAGGATGCATGAGGAGAAACTCTTACAGAAGCAGCAGCATCAGGAGGAAAGACTCCGACTTGCGACAGAAAGAGCATACGCACATGCCAAGAAGACTGTGAGAAAGCTGATGATGCGCTCAAAGCCACCAACAGTTAAGAAAAAGGGCACCACAGACACAACAGACGCCAgagaagaagaaatatatttctttacatGAGCTCCCTCCCTCACAGCTTTACACAAGTGCGTTTTCAGTAACCAAAATTAATGCATCAAAACTAACTGTACCTGAAGTACTTTGcgttgggctttttttttttatgtaacaaCTTTACATTAAGAAACCCAGAACCCCATCCctcttaaaagaaaataaaaagcacacaagCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012928 True 1637 mRNA 0.49 13 14332782 14340902

Neighbor

gene id symbol gene type direction distance location
AMCG00012930 hal,LOC103041200,LOC107670217,LOC107740873,LOC108275357,LOC102785645 coding upstream 7909 14315841 ~ 14324873 (+)
AMCG00012929 lta4h coding upstream 19553 14299408 ~ 14313229 (+)
AMCG00012926 cdk17,LOC107658862,LOC107656329 coding upstream 73619 14228638 ~ 14259163 (+)
AMCG00012922 NA coding upstream 157159 14163667 ~ 14175623 (+)
AMCG00012923 NA coding upstream 179921 14146487 ~ 14152861 (+)
AMCG00012934 NA coding downstream 25196 14366098 ~ 14395069 (+)
AMCG00012935 NA coding downstream 64656 14405558 ~ 14419258 (+)
AMCG00012936 NA coding downstream 92901 14433803 ~ 14451103 (+)
AMCG00012939 LOC103459300,LOC104941780 coding downstream 138174 14479076 ~ 14510489 (+)
AMCG00012942 NA coding downstream 233691 14574593 ~ 14580228 (+)
G40920 NA non-coding upstream 146646 14185240 ~ 14186136 (+)
G40846 NA non-coding upstream 344694 13986950 ~ 13988088 (+)
G40824 NA non-coding upstream 447593 13883261 ~ 13885189 (+)
G40788 LOC107575789 non-coding upstream 1071603 13260644 ~ 13261179 (+)
G40777 NA non-coding upstream 1217250 13115312 ~ 13115532 (+)
G40963 NA non-coding downstream 44 14340946 ~ 14344481 (+)
G40986 NA non-coding downstream 54674 14395576 ~ 14395899 (+)
G40989 NA non-coding downstream 56695 14397597 ~ 14397855 (+)
G41054 NA non-coding downstream 284350 14625252 ~ 14625850 (+)
G41058 NA non-coding downstream 287681 14628583 ~ 14630610 (+)
G40629 NA other upstream 1796853 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 1832380 12453239 ~ 12500402 (+)
AMCG00012848 NA other upstream 3790822 10540728 ~ 10541960 (+)
G40224 NA other upstream 3888335 10436907 ~ 10444447 (+)
AMCG00012820 nt5dc3,LOC102307862,LOC107753643 other upstream 5202571 9112460 ~ 9130211 (+)
G40999 metap2,LOC108428789,LOC100194705 other downstream 87411 14428313 ~ 14433201 (+)
AMCG00012940 LOC107748465 other downstream 175881 14516783 ~ 14529806 (+)
G41059 NA other downstream 291455 14632357 ~ 14633413 (+)
AMCG00012954 NA other downstream 740517 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 957060 15297962 ~ 15317344 (+)

Expression


Co-expression Network