AMCG00012936


Basic Information

Item Value
gene id AMCG00012936
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14433803 ~ 14451103 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012936
ATGCTTAAACGAGTGGAAACTGGAGACACTTCAAACCCCGGGCCATTGTATTTCTTTGATCAGACTGCAGGTGATCGGACACACAGGAGGCGCATGAAGAAGCCGCTGGACGAGCTGCCGCCGGACCTCAGATACCTCAACATCAACCCGCGCCTGGCAGCTTTCATTAGGAGGGGCAAAAAGGTGGTATCCGACGTTGTGTCCGCAGACGATAATGCAGACGTTAAGaccaaagagaaagaaaaacagacggCTTTGCCAGAGCTCAGTACCGACCCTGGAGCTCTGGACAGCACTGACCCCGACCAGGCGCTGCTGGCCGTGCAGGGTGGACAGGGCTTGCCCGGGGAGGAAGAGGACATGAGCCCGGTTGAGGAGTATAAGTATATTGCGCCCCAGCTGCTGTCCGAGCTGGGGACGTGGCTGTGGGAGTGCTCCGGCCGGGGAGAGGGGAGCTTCCCCAGAGGACTCCTCAACGTCCTGAGCTACAGCTGGAGAGAGCTGGCGGAGGCGGCAGTGGACAGCCGGAGACAGGGGCACTCGCTGGCTTATAAGAGCACGAAACACGGCCAGCTCAAAGGCTCCGAGGCCTGCGAGAGTCAGTCTGACGAGACCCCCCCAGATAAAAGTCATCACGGAAAGATGAAAGCAAAGAAGAGAGTAGGCGCACCTGCCGAAAACGTGACTGGGAAGAGCTCGCAAGAGACCTGTGAAGATGAAGGTTGGATTGTCCAGCAAGAAGAGCCCAAACCCAATGACCCCGAGTGGACAGCGCTCTGCCAATGGGCTGTGGAGCGGCTCCAGCTTGCTCAAGTGCCAATCAACACTGTGGTTGTGGCATTTGACCAGAGAGGAGGAATGATGTGTGACAAGGAGGGCACTGTGAAACGACAGTGGAACTGGGTCCGGGGAGCCAAACTAGACGAACCAATTGTCATAGAGGTGACTGAGTTCATCACTGTGCGAATCATGAGCCCGTCCTCGGCCAGTCTGTCCTACAGGGCTCACGAGGAGAGCGTccagctgtctctctctcccctcggAAACGTCTCTCCTCCAAAGCACAGGGATCTGGGTTTGATCATGAGTGATGAAAAGTTCTCCTCTGACACAGCATGCCAACTCTCAAAAGCTAACAGGAAGAAAATGATAGAGATTGAGGCCAGGAGGAAATTCAAGGCAAAGATTTCGACAGCTACCAAATCAAGAAGTGAATTTCTGGAGATGGCAAAGACGCTGGAGACCCTGGAAGAGGAGTCTGGTTACCAGCGAGGGCTAAAAGCAGCGCAGGAACTGAAAAAGCTTCAGCGGAAGACCTCGCTGAAGCGTAAGACTCAGTCAGCTGTCTTGCCCACACTGGCTCCTATTTGTGCAGAGGAGAATGAGGCAGGGCCTGCACTGAGCAACGCTGAGAAGAGACCCTTGCGTCGCCTGACTGCGCCAGCACACAGCAGCCGGGCCAACTCTCCTGTGCGTAAGAgtgagaaggaggaggaacagCATCTCATCACGGAGGCAGGAGCGCTCAGGGTTCACAGCAACATCAGACTAGATCCAGAGAAGTGCAGACCACCGCTCACGTCCTTGACGTGCCCCTGTCCAGTGCTGCTGAGGAATGCAatgctgggggagggggacaaaaaaatgtgcaaatgcagCAACCACCAGATGCCGTCCCTGACAGACATGGAGTGCGATGCCTTCGTCCAAGGCCAGGCGCTCCACAGCCAGCAGGTCCTGGTGGTGTGTGTCACCTCCTCAGCAGGGCCGCAGAGCCAGTTCCGCATGGGTGTCCTGGAGGAGCTGTATGAGAAGATGAACAGAAACCGGAGCATGCCTTGTGCTCAGTGTCGTCAGGACACCTTCCGCCTGGTGAAGTATGACGTCTCTACCGCTGGCACACATGCCTCCCGCCGCACCCCCCTGCTGTTGCAACGACACAACGTGGCTCCCGGAATGTTCCTGGCCTTTATTTCTGTGTCATTTCAGATGTACATGAGTGGGAAGTTGTTGTTTGCCGATTACATCTTCAATGGGTACAGCTGCTCGGTAAAAGACCTTCAGAAACAGATCAGCAAAACTCGTGGAGACTACGGCAAGGGCCATTGTCTGCCCGTTGACTTCAGACTCagTCCCCAGAGGCAGACGCCCGAGACCGTTGACTCTCTTGCACCCCCAGGCCCGACTGCCAAAGCTAGGAAtggagaacagagagagagctgtcaGTCAAGAGCCACCTTACAGTCAGAAGAGTCTAAACTCCAGCCCAGCGGCAGAGCACAATCCGTTCAAGAGTACGTAACATTCAGCACGTCCAAGAGAAGCCACCTGCTCAGTGGCCAGAAGAGCCTCCCAGTCCCCTTTCCCTCCctgaacacagagagaggcTCGCAGACGTCTGGGCCTACCAGACTGCTGACCGGCTCCACCGGCCCCAGGCCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012936 True 2445 mRNA 0.56 16 14433803 14451103

Neighbor

gene id symbol gene type direction distance location
AMCG00012935 NA coding upstream 14545 14405558 ~ 14419258 (+)
AMCG00012934 NA coding upstream 38734 14366098 ~ 14395069 (+)
AMCG00012928 NA coding upstream 92901 14332782 ~ 14340902 (+)
AMCG00012930 hal,LOC103041200,LOC107670217,LOC107740873,LOC108275357,LOC102785645 coding upstream 108930 14315841 ~ 14324873 (+)
AMCG00012929 lta4h coding upstream 120574 14299408 ~ 14313229 (+)
AMCG00012939 LOC103459300,LOC104941780 coding downstream 27973 14479076 ~ 14510489 (+)
AMCG00012942 NA coding downstream 123490 14574593 ~ 14580228 (+)
AMCG00012941 NA coding downstream 201741 14652844 ~ 14681647 (+)
AMCG00012947 NA coding downstream 329462 14780565 ~ 14793388 (+)
AMCG00012946 NA coding downstream 346609 14797712 ~ 14811683 (+)
G40989 NA non-coding upstream 35948 14397597 ~ 14397855 (+)
G40986 NA non-coding upstream 37904 14395576 ~ 14395899 (+)
G40963 NA non-coding upstream 89322 14340946 ~ 14344481 (+)
G40920 NA non-coding upstream 247667 14185240 ~ 14186136 (+)
G40846 NA non-coding upstream 445715 13986950 ~ 13988088 (+)
G41054 NA non-coding downstream 174149 14625252 ~ 14625850 (+)
G41058 NA non-coding downstream 177480 14628583 ~ 14630610 (+)
G41075 NA non-coding downstream 223962 14675065 ~ 14677245 (+)
G41082 NA non-coding downstream 239007 14690110 ~ 14690674 (+)
G41084 NA non-coding downstream 253857 14704960 ~ 14705185 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 602 14428313 ~ 14433201 (+)
G40629 NA other upstream 1897874 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 1933401 12453239 ~ 12500402 (+)
AMCG00012848 NA other upstream 3891843 10540728 ~ 10541960 (+)
G40224 NA other upstream 3989356 10436907 ~ 10444447 (+)
AMCG00012940 LOC107748465 other downstream 65680 14516783 ~ 14529806 (+)
G41059 NA other downstream 181254 14632357 ~ 14633413 (+)
AMCG00012954 NA other downstream 630316 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 846859 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 1026076 15477179 ~ 15818342 (+)

Expression


Co-expression Network