AMCG00012941


Basic Information

Item Value
gene id AMCG00012941
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14652844 ~ 14681647 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012941
CTCCAAGCAGCTGCTGTTGAGCTCCTTGGCAAGTAAATGAGAGACTCGACACCACATGTTTACACGACTAGGCTGTGCCGTTATTTCAGCGTTGAAAGGTCCCCTAGGTGAGGTAACCCTCTGGGATGACATCAgggcaggaggaggagcctGTTGCCAGACACCCTTCAATTGCCCAGAGAGACCTATCTGCCGGCATGATGAATCCCTCTGCTCTAGCACAGTCGGCGCCCCTGTTTCCAGCCATGGCCGCTGTGAGCAGTAACCCCGCTGGAATGCATGGGAGTCCGGGGATTGGAGCCTCTGACATGGAGTTGCAGAAGATGCTGATTGACGAAAGGATGCGGTGCGAGCATCACAAAACCAACTATCAAACGCTCAAAGCTGAACACACAAAgCTGCAGGATGAGTTCGCGCGGGCACAGGGCGACCTGAAGCACCTGCTGATGGAGAAACGCACAGCGCAGGAGAAGATGCAGCTGCTGTTCGCTGAACTCCGGGGAGAGCTGTTAGATAAAACAAGGGAGCTAGAGGAGCTGAAAATGCAGGTTCTCACTCCACCAAAACTGGAGCTGCTGCGAGCTCAGATCCAACAGGACTTGGAGACGCCGATGAGAGAGCGATTCAACAAGCTGGAAGAGGAAGCAGAAAAATACAGGTCTGATTACAACAAGCTGCGCTATGAGTACACTTTCTTAAAGTCCGAGTTCGAGCACCAAAAGGCAGAACATGCCCACACATTGGAAGAAAGAAACATCCGGTTTGAGACGGAGTTATCCAGATTGGAAAAGGACAAGGAAGAGCTGAGCAATCAGCTTCTGAGCACAGATCCTACCAGAGACACCAAGCGTGTTGAGTCTCTGCTGCGTGAGAAGGCCCAGCTGCACCAGAGGCTGCGGAGCCTGGAGGCCGAGGTGGCGGAGCTACGGGCGGAGAGGGACAACTCTGGGCTGCAGGCCGAGAACGTGCAGAGGATCCAGGTGCGACAGCTGGCTGAATCGCAGGCTGCTGTCAAGTCACTGGAGGCAGAGAAGCAGTCTCTGAAGCTACAACTGGAACGCCTCGAGCGAGAGTTGCAGCTCAGTCATGAGCACAACGCCCAGCTCACTGGCAAACTGCACAAGACCGAGCGCGAGGCCAGTGCTCTCACCAGCAAAgtgGAGGAACTCAAACACACCCATAAGATTGAGGTGGCTAATATTAAGCTGGAGTGTGTGAGGTCAAAGGGCGAGGTGGAGAGGGAGCGAGACGGCCTGCACAGCCAAGTTGAGGGACTGCAGGCAGACGTGGATATCCTGAAGATCACCGTTGACAGGAACAAGGAGCTCCTGTCTGAGAAGGAGCGTGAGTTAGTGCGCAAAGTGCAGGCCGCCAGGGAGGAGGAGCTTCACAAGCTGGCAGCACTGCAGGATGAAAAGCTGGAGCTGGAGAGCTGCGTGgcagagctggagcagcagaGGGCATCACAGGAGGCTGCTGGGAATTCGGACAGGGAGCAGTGTCAGGAGAAGCTGCGTGCCGCCCAGTTGAGCGAGGAGAGCGCTAGAAAAGACGCCCAGAACCTGAGTGCCTTGTCGCACTCCGAGAATGACCTGCTGGACACGAATCGCCGACTGAAGGAGTTGCTGGAGCGGCTGAAGGAGGAGCTGCGAAACGCCCGTGGACAGGCGGAGAGGGCGCAGCACGAGGCAGAGAAGCTGCTGGAGGACCGGCGCATTGAGTGGCTGCAGGAGAAGCACCAGCTGCAGGAGCAGGATGCGCAGCTGCAGGAGAAGCACAGCCAGGTCAAGGAGAAGCTGCACAGGGCTGCCGCTGCCCAGAAAAAGGTATCCGCCCTGACGCTGATGCTGCGCCGACACCATGGTGACCACCCCGCCCGTGGTTCCCTGGGTCCTGCACTCTCTTCCCACTGTGGGAATAGGAAGACGTTGACTGAAAGCAAGCAGAAGCGAATGCAGGACAAAATCCAGCTGCTAGAAGCGAAGATACAAGAATTAGAGATTGAGAACAGCACCTTAAACAAGAAGCCGGCCTACGCTGCGGACCAGGCCCAGCTCCACAGGAGGATGAAGGAGCTGCAGCGCCGGCACAACGAGTTCCGCCGCCTCCTCCTGGGCCCCACAGCCACAGCAGCAGGGATGACCCACTCGGCTGCTTTCCTCTCGTCCACTTTAGTGCCAGGGGCTGAAATGACTTTCCCCAATCTCCAAAAAGAGGACGTCCAGAAAGAGGCTTTTCTCTTCCTGTGCGACAGtaaGGAGCCCAGTGTCTGA

Function

GO: NA

KEGG:

id description
K16754 CEP83, CCDC41; centrosomal protein CEP83

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012941 True 2273 mRNA 0.57 18 14652844 14681647

Neighbor

gene id symbol gene type direction distance location
AMCG00012942 NA coding upstream 72616 14574593 ~ 14580228 (+)
AMCG00012939 LOC103459300,LOC104941780 coding upstream 142355 14479076 ~ 14510489 (+)
AMCG00012936 NA coding upstream 201741 14433803 ~ 14451103 (+)
AMCG00012935 NA coding upstream 233586 14405558 ~ 14419258 (+)
AMCG00012934 NA coding upstream 257775 14366098 ~ 14395069 (+)
AMCG00012947 NA coding downstream 98918 14780565 ~ 14793388 (+)
AMCG00012946 NA coding downstream 116065 14797712 ~ 14811683 (+)
AMCG00012945 NA coding downstream 152843 14834490 ~ 14851076 (+)
AMCG00012949 LOC108428177 coding downstream 197115 14878762 ~ 14922962 (+)
AMCG00012952 kcnd2,LOC108412901,LOC107658801,LOC107744998 coding downstream 293063 14974710 ~ 14975822 (+)
G41058 NA non-coding upstream 22234 14628583 ~ 14630610 (+)
G41054 NA non-coding upstream 26994 14625252 ~ 14625850 (+)
G40989 NA non-coding upstream 254989 14397597 ~ 14397855 (+)
G40986 NA non-coding upstream 256945 14395576 ~ 14395899 (+)
G40963 NA non-coding upstream 308363 14340946 ~ 14344481 (+)
G41082 NA non-coding downstream 8463 14690110 ~ 14690674 (+)
G41084 NA non-coding downstream 23313 14704960 ~ 14705185 (+)
G41092 NA non-coding downstream 46535 14728182 ~ 14728449 (+)
G41096 NA non-coding downstream 54174 14735821 ~ 14736661 (+)
G41158 NA non-coding downstream 244678 14926325 ~ 14955039 (+)
G41059 NA other upstream 19431 14632357 ~ 14633413 (+)
AMCG00012940 LOC107748465 other upstream 123038 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 219643 14428313 ~ 14433201 (+)
G40629 NA other upstream 2116915 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 2152442 12453239 ~ 12500402 (+)
AMCG00012954 NA other downstream 399772 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 616315 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 795532 15477179 ~ 15818342 (+)
AMCG00012973 NA other downstream 884846 15566493 ~ 15569943 (+)
AMCG00012978 NA other downstream 889259 15570906 ~ 15573468 (+)

Expression


Co-expression Network