AMCG00012947


Basic Information

Item Value
gene id AMCG00012947
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 14780565 ~ 14793388 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012947
AGCTACGGTGGTTAGTGTTTGACAATGAGCGTCACAAGACGTGGTGCGTCAGGCACGTAATGACGCAGCACGCACGCGGGAAAACCAAAAATGGCCGGAGCGCGGTTGTTTGAAATCTTCTTAACAGGAATCTGAATAACAGCAACTCAGGGGGTATATTTGTAAGCAATCGAAGAAGgatttgtattaaaaagaaaatggatgaTGCCGAATCAAGATTCACTCACCTTCTCCAGCCCATCCGGGATCTGACCAAGAACTGGGAGGTTGATGTGGCTGCTCAGCTTGGGGAATACCTAGATGAGCTGGATCAGATCTCAATCTCCTTTGATGGAGGGAAAACTACAATGAACTTTGCAGAGGCGGCCCTGCTCATTCAGGGGTCAGCCTGTATCTACAGTAAAAAGGTGGAATATTTGTACTCTCTGGTCTGTCAAGCCCTGGACTTCGtctcaaataaaaaACGGGACAGACAAGTGGCCTCGGTGGGGCAGGATGGTGTGGACAACGATGCCACCTTCGCCTACAGGAACGAAGAGGAGGAGtTCCTGTCTTTGGATGACATCAGTAACGGGAGCAAAACAAGCGTAGACCTGAAGAGAGACACCAATCCCAACgCTGTTGAAATAGTCCCCCTAACTCCCATGGCTCTGGTGGCTGCAGAAGACGCTGAGAAAAAGATCAATCCCCTTTACAGCCGAAACGGAGAGATCCTCGGCAGCTGTAAGGATTTCCGTATGAACACCTACACACCCCACGGCCAAGGGACCTTCCTGCTGGATCTGGCTGAAATGACTCCTTTGCAGTTTCTAAGGGATTTGCATATGAACAACCAAAACAATTCAGTTCTCAATGGAGCCCCCATGGACCTGAATGGGAACATGCCGCAAGACCTGACAGACCATGAGGCTCCACTCCCTGTGCTAAATTTATCACCCAGAGAGGACAGAGATCCTCCTTGTGATGATGCTGCAGACTGGTTCATTCCTCTTGAAGATGACAATGGGATGGAGGTGGAGCCAGGCTccgacacacacatagacagacaTCAGGCTCCCAGTGACCGGTATCTGCTGAGAGAGAGGATCCCTCCTGAGCCACCAGCAGAGAAGACAGCCAAGGAAGCCCTGGACCCGTGGAGGAGCCTTGATCCGTTCTCCTGTTCTGAAGACAAGCCCCTTAAAAAAGGCAAACACTATACGGTACCTCGGAGCGTCCAGGAAACGGACGGTAacaagaggaaaaggaaaagtccTTCAAAGCTGCTGGACTTCATGAAGTGGCTCTCGGGAGCATACATGGAGTTATTGTACTGGAAACACATGAAAGAGAAACTAGCAGCACAGAGGAAATTACTGAAGAAAAAGGGTGCTCTATATCCCAACGAGGCTCCGGAGCAACCGCACAACGTGGGGGGTGATGAAGAGGAGAGAGACGAAGCTGAAGTAGTCCGGCACGATGACTATCTGGATAATGATCAGGGGGATGTCTCTGGACCTGAGGACTTCGTAGACGAACCGGAAGAAATTGCGGAGGACCAGGACCTGGTTATAACGGCGTCTCAGGGGGACGTCCTGAATTATGAGGATTTGGTCAGAAAAAACGTGGATCTGTTCATTGCCAACTCTCAGAAGTACGCACAGGAGACGGTGCTGTCTCTCAGGGTGAAGGAGTGGGAAGACAAGATGGGCCCCCAGCTCACTGCACAGGAAGAGAGACTAGCTTTTGACATCCACGATTATGGGAATAAGATCATAGACGCCTTCAGCTGCGTTTCAGAGAGACGGACGTTTGCCTCCATCGTGAGAGGGAAGGAAGAGTTTGAGGTGTGCCGTTACATGCTGGCGTCTCTGCAGCTGGCAAATGACTACACAGTAGAGATCCACAAAAACGCAGGGCTGGAGGAAGCGATTGACACCATGGAGTCTGGGTAG

Function

GO: NA

KEGG:

id description
K11490 NCAPH2; condensin-2 complex subunit H2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012947 True 1934 mRNA 0.51 21 14780565 14793388

Neighbor

gene id symbol gene type direction distance location
AMCG00012941 NA coding upstream 98918 14652844 ~ 14681647 (+)
AMCG00012942 NA coding upstream 200337 14574593 ~ 14580228 (+)
AMCG00012939 LOC103459300,LOC104941780 coding upstream 270076 14479076 ~ 14510489 (+)
AMCG00012936 NA coding upstream 329462 14433803 ~ 14451103 (+)
AMCG00012935 NA coding upstream 361307 14405558 ~ 14419258 (+)
AMCG00012946 NA coding downstream 4324 14797712 ~ 14811683 (+)
AMCG00012945 NA coding downstream 41102 14834490 ~ 14851076 (+)
AMCG00012949 LOC108428177 coding downstream 85374 14878762 ~ 14922962 (+)
AMCG00012952 kcnd2,LOC108412901,LOC107658801,LOC107744998 coding downstream 181322 14974710 ~ 14975822 (+)
AMCG00012951 NA coding downstream 249631 15043019 ~ 15048845 (+)
G41096 NA non-coding upstream 43904 14735821 ~ 14736661 (+)
G41092 NA non-coding upstream 52116 14728182 ~ 14728449 (+)
G41084 NA non-coding upstream 75380 14704960 ~ 14705185 (+)
G41082 NA non-coding upstream 89891 14690110 ~ 14690674 (+)
G41075 NA non-coding upstream 103320 14675065 ~ 14677245 (+)
G41158 NA non-coding downstream 132937 14926325 ~ 14955039 (+)
G41184 NA non-coding downstream 367048 15160436 ~ 15166469 (+)
G41225 NA non-coding downstream 443899 15237287 ~ 15285288 (+)
G41226 NA non-coding downstream 454990 15248378 ~ 15264573 (+)
G41230 NA non-coding downstream 491953 15285341 ~ 15287816 (+)
G41059 NA other upstream 147152 14632357 ~ 14633413 (+)
AMCG00012940 LOC107748465 other upstream 250759 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 347364 14428313 ~ 14433201 (+)
G40629 NA other upstream 2244636 12488575 ~ 12535929 (+)
AMCG00012894 gdi2,LOC107585127,LOC107560733,LOC107754057,LOC107694307,LOC107757239 other upstream 2280163 12453239 ~ 12500402 (+)
AMCG00012954 NA other downstream 288031 15081419 ~ 15136729 (+)
AMCG00012961 NA other downstream 504574 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 683791 15477179 ~ 15818342 (+)
AMCG00012973 NA other downstream 773105 15566493 ~ 15569943 (+)
AMCG00012978 NA other downstream 777518 15570906 ~ 15573468 (+)

Expression


Co-expression Network