Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00012948 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030125.1 |
| NCBI id | CM030125.1 |
| chromosome length | 49972098 |
| location | 14795042 ~ 14796838 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008535 | respiratory chain complex IV assembly | biological_process |
| GO:0001654 | eye development | biological_process |
| GO:0006825 | copper ion transport | biological_process |
| GO:0006878 | cellular copper ion homeostasis | biological_process |
| GO:0005743 | mitochondrial inner membrane | cellular_component |
| GO:0005507 | copper ion binding | molecular_function |
| id | description |
|---|---|
| K23755 | SCO2; protein SCO2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00012948 | True | 1125 | mRNA | 0.48 | 2 | 14795042 | 14796838 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00012943 | socs2,LOC107590271,LOC107732999 | coding | downstream | 22435 | 14757801 ~ 14772607 (-) |
| AMCG00012944 | NA | coding | downstream | 92440 | 14675085 ~ 14702602 (-) |
| AMCG00012937 | NA | coding | downstream | 320461 | 14452415 ~ 14474581 (-) |
| AMCG00012938 | metap2 | coding | downstream | 361886 | 14424811 ~ 14433156 (-) |
| AMCG00012932 | NA | coding | downstream | 463240 | 14326065 ~ 14331802 (-) |
| AMCG00012955 | tspan12,LOC102782178,LOC108228819 | coding | upstream | 255125 | 15051963 ~ 15065613 (-) |
| AMCG00012956 | NA | coding | upstream | 281260 | 15078098 ~ 15079375 (-) |
| AMCG00012959 | NA | coding | upstream | 369112 | 15165950 ~ 15174248 (-) |
| AMCG00012958 | NA | coding | upstream | 379450 | 15176288 ~ 15212332 (-) |
| AMCG00012964 | NA | coding | upstream | 422495 | 15219333 ~ 15233107 (-) |
| G41102 | NA | non-coding | downstream | 58413 | 14733735 ~ 14736629 (-) |
| G41088 | NA | non-coding | downstream | 77478 | 14717234 ~ 14717564 (-) |
| G41047 | NA | non-coding | downstream | 206916 | 14587845 ~ 14588126 (-) |
| G41020 | LOC107748465 | non-coding | downstream | 265269 | 14528154 ~ 14529773 (-) |
| G41030 | NA | non-coding | downstream | 284357 | 14508557 ~ 14510685 (-) |
| G41138 | NA | non-coding | upstream | 45405 | 14842243 ~ 14922316 (-) |
| G41191 | NA | non-coding | upstream | 278596 | 15075434 ~ 15077820 (-) |
| G41224 | NA | non-coding | upstream | 438782 | 15235620 ~ 15235862 (-) |
| G41243 | NA | non-coding | upstream | 440452 | 15237290 ~ 15278312 (-) |
| G41369 | NA | non-coding | upstream | 769671 | 15566509 ~ 15569851 (-) |
| AMCG00012931 | snrpf | other | downstream | 450570 | 14340416 ~ 14344472 (-) |
| G40778 | LOC107575789 | other | downstream | 1679555 | 13114893 ~ 13115487 (-) |
| AMCG00012906 | kin | other | downstream | 1888709 | 12896520 ~ 12906333 (-) |
| AMCG00012888 | mkln1,LOC107104017 | other | downstream | 2523253 | 12240396 ~ 12271789 (-) |
| AMCG00012856 | lsm8,LOC107592220,LOC107580766,LOC107656302 | other | downstream | 3932720 | 10857881 ~ 10862322 (-) |
| AMCG00012985 | NA | other | upstream | 922675 | 15719513 ~ 15722457 (-) |
| AMCG00013018 | NA | other | upstream | 1833393 | 16630231 ~ 16639087 (-) |
| AMCG00013038 | NA | other | upstream | 3083387 | 17880225 ~ 17910017 (-) |
| AMCG00013042 | NA | other | upstream | 3133060 | 17929898 ~ 18046714 (-) |
| G41807 | NA | other | upstream | 3379223 | 18176061 ~ 18191522 (-) |
