AMCG00012956


Basic Information

Item Value
gene id AMCG00012956
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15078098 ~ 15079375 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012956
ATGAGAGCGAATGAGACGGATAGGTGGGAGCAGGCGAACTGTACTAAGTGGTGCAGTGGCTCTGCCGTGAGCCTCGCCGTGGCCGGCGGCGTGCTGCTCTTGTTCACCTGCCTGGCCGGCGTGTCTGGCAATGCCCTGGTGATCCTGGCTGTGTCCCGGCAGAAGTGCCTGCAGACCTCCAGCAACGCGCTGCTCGTTAACCTGGCGCTCAGCGACCTCCTCCGGTGCGGCATCGACTGCCCCTTGCTGCTCGCCATCAGCGTGTGCGGCTACAGCGGCCAGGATCTGGGCAGCGCGGTGTGCGACGCCCAGGCGGTGTGTTTCTCCCTCAGCTGCCACGTCCAGCTCCTCACCATAGTCAGCATCAGTGCCGAGAGGTATCAGGCCGTAGCGCGACCTTTCAAAGGCAgccagaggaagaggaggattcAAATCTGGATACCTCTCACCTGGGCGGTGGCGGTGCTCCTGTCCCCCCTGTGCTTAACCTTAGCCCGGGACAGCCCGGTGTACATGAAATGCAGGGCAATGCCCACAGGGGTGCTGGCATCCTTCGACGCTTTCGGACTTTACGTGTTAGTGCCGGTGTGGTTCGCGTCCTTAACCGTCATTACGGGGTGCTACGGCCGCATATTTGTCCTAGTGAAGATGCACGCTaagaaaatatttgataaaGGAATCGGCCACCCTGCTCCCTCCGTGAAACAGACCCAAAGTGTAGAAACCCAGGGGAAGGGACCCGCCGACGGAGAAAAGCCACAGGACACACTTACCGAAAGCACAGCCGCTGTGCCTGGAGTGGTAAGTGCAGCACCGTTGGGGGAGCCGCCAATGTTATCCGCGGCTGAAGTCCACAATACAGAAACTGTTCTCCCAGCCATTTCTGTTACTGCACACGACATATCGGATCAGATTCCCACACCTGCCATATCGCCGACTAAACCCGACTCGTGTGCTACTGTGCCGTGTCCGGGGCGGCAGCCTCGGGATGCTCTTTCTGCATCGGACATCCCAGAGGCGCATCTGTCCGCAGGGGCTGAAGCCCGCCGCCCCTCCGCACCCGTGTCCGCCGCCCCGGGGCCCGATCTGACGGGGGCCGTGTGCATGATGCCCTCGTTTGCCAGCAAAGAGCGAGCGAGAAAGAGCAAAGAAAGCAAGCTGGCAAAACGGTCGGGCTACATCATCGTCACCTTTCTAGCTCTCTGGATGCCGCTCGTTGTGTCGGTGCTGGTGAATTTCTTCAACTACAGCAATCGACGAGCAGTAagtcttaattga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012956 True 1278 mRNA 0.60 1 15078098 15079375

Neighbor

gene id symbol gene type direction distance location
AMCG00012955 tspan12,LOC102782178,LOC108228819 coding downstream 12485 15051963 ~ 15065613 (-)
AMCG00012948 NA coding downstream 281260 14795042 ~ 14796838 (-)
AMCG00012943 socs2,LOC107590271,LOC107732999 coding downstream 305491 14757801 ~ 14772607 (-)
AMCG00012944 NA coding downstream 375496 14675085 ~ 14702602 (-)
AMCG00012937 NA coding downstream 603517 14452415 ~ 14474581 (-)
AMCG00012959 NA coding upstream 86575 15165950 ~ 15174248 (-)
AMCG00012958 NA coding upstream 96913 15176288 ~ 15212332 (-)
AMCG00012964 NA coding upstream 139958 15219333 ~ 15233107 (-)
AMCG00012971 NA coding upstream 187839 15267214 ~ 15304371 (-)
AMCG00012970 NA coding upstream 237718 15317093 ~ 15324723 (-)
G41191 NA non-coding downstream 278 15075434 ~ 15077820 (-)
G41138 NA non-coding downstream 155782 14842243 ~ 14922316 (-)
G41102 NA non-coding downstream 341469 14733735 ~ 14736629 (-)
G41088 NA non-coding downstream 360534 14717234 ~ 14717564 (-)
G41047 NA non-coding downstream 489972 14587845 ~ 14588126 (-)
G41224 NA non-coding upstream 156245 15235620 ~ 15235862 (-)
G41243 NA non-coding upstream 157915 15237290 ~ 15278312 (-)
G41369 NA non-coding upstream 487134 15566509 ~ 15569851 (-)
G41386 NA non-coding upstream 559504 15638879 ~ 15639990 (-)
G41402 NA non-coding upstream 710917 15790292 ~ 15822009 (-)
AMCG00012931 snrpf other downstream 733626 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 1962611 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 2171765 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 2806309 12240396 ~ 12271789 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 4215776 10857881 ~ 10862322 (-)
AMCG00012985 NA other upstream 640138 15719513 ~ 15722457 (-)
AMCG00013018 NA other upstream 1550856 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 2800850 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 2850523 17929898 ~ 18046714 (-)
G41807 NA other upstream 3096686 18176061 ~ 18191522 (-)

Expression


Co-expression Network