AMCG00012962


Basic Information

Item Value
gene id AMCG00012962
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15260248 ~ 15260925 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012962
TTAAGAGAAGAACCGGGAATAAAAATCTTCAAATGCAATTCTCCCATCTACTTCGCCAATATCGATTTCTTTAGAGACCGCTTAAAGGCAATTGTGGGGGTGGATGCAGTGAGAGTTCATAAGAAGAGGACCAAGGCCCTGAAGCAGATACAGAGACTCATTAAGAAGGGAAGGTTAAGAGCGACTAAGAATGGCATGGTGTCAACTACAGGCATTGACAACAACGTCTTTGAGCAAGACAAGGACACAGAAAAAGTGGAGGACAGTGATATCCCCAGCACACAGGTGGACATACAGGTGGACTGGAATGCCGATCTGCCGGTGAAAGTGGCTGTGCCAAAAGTCCATATCCACAGTCTCATCTTGGATTTTTCAGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012962 True 378 mRNA 0.46 3 15260248 15260925

Neighbor

gene id symbol gene type direction distance location
AMCG00012957 NA coding upstream 35735 15212988 ~ 15224513 (+)
AMCG00012953 NA coding upstream 108425 15145480 ~ 15151823 (+)
AMCG00012950 ing3,LOC106576172,LOC106609303 coding upstream 183370 15067090 ~ 15076878 (+)
AMCG00012951 NA coding upstream 211403 15043019 ~ 15048845 (+)
AMCG00012952 kcnd2,LOC108412901,LOC107658801,LOC107744998 coding upstream 284426 14974710 ~ 14975822 (+)
AMCG00012960 NA coding downstream 14027 15274952 ~ 15279247 (+)
AMCG00012963 cog5,LOC106609192 coding downstream 159918 15420843 ~ 15475870 (+)
AMCG00012972 NA coding downstream 265109 15526034 ~ 15531609 (+)
AMCG00012974 NA coding downstream 284710 15545635 ~ 15554052 (+)
AMCG00012980 NA coding downstream 355332 15616257 ~ 15618444 (+)
G41184 NA non-coding upstream 93779 15160436 ~ 15166469 (+)
G41158 NA non-coding upstream 305209 14926325 ~ 14955039 (+)
G41096 NA non-coding upstream 523587 14735821 ~ 14736661 (+)
G41092 NA non-coding upstream 531799 14728182 ~ 14728449 (+)
G41084 NA non-coding upstream 555063 14704960 ~ 14705185 (+)
G41230 NA non-coding downstream 24416 15285341 ~ 15287816 (+)
G41265 NA non-coding downstream 219766 15480691 ~ 15483321 (+)
G41282 si:dkey-180p18.9,akr1b1,LOC107729832,LOC107690495,LOC107587162,LOC107725652 non-coding downstream 295221 15556146 ~ 15559305 (+)
G41303 NA non-coding downstream 458582 15719507 ~ 15722866 (+)
G41325 NA non-coding downstream 598139 15859064 ~ 15859370 (+)
AMCG00012954 NA other upstream 123519 15081419 ~ 15136729 (+)
G41059 NA other upstream 626835 14632357 ~ 14633413 (+)
AMCG00012940 LOC107748465 other upstream 730442 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 827047 14428313 ~ 14433201 (+)
G40629 NA other upstream 2724319 12488575 ~ 12535929 (+)
AMCG00012961 NA other downstream 37037 15297962 ~ 15317344 (+)
G41264 hbp1,LOC108230206,LOC107701066 other downstream 216254 15477179 ~ 15818342 (+)
AMCG00012973 NA other downstream 305568 15566493 ~ 15569943 (+)
AMCG00012978 NA other downstream 309981 15570906 ~ 15573468 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other downstream 359810 15620735 ~ 15631003 (+)

Expression


Co-expression Network