AMCG00012970


Basic Information

Item Value
gene id AMCG00012970
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15317093 ~ 15324723 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012970
ATGGGAGTACTCCAGATAGGGTTTCTGGTACGATACCTCTCTGACCCCTTGGTGGGGGGCTTCACTACTGCGGCAGCCTTCGAAGTCCTTGTCTCTCAACTAAAACTAGTTCTTGCAGTGCCAATACACAACTATGATGGAGTTCTTTCAATGATATATACAATcattgacattttcaaaaatattcatCTCACCAACATTGCGGATCTGGTTGCGGGTTTGCTGACCATTTTAGTTATAATGGCAGTAAAGGAACTCAACACTAAATACCAGCATAAAATTCCAGTGCCAATTCCCATTGAAGTCATAGTGGCTATTGTTGCAACAGCCATCTCTTACAGTGTTAACTTGCAGGCAAAGTACAATGCACACATTATCAAGAGCATCCCAAGGGGaTTTCTGCCCCCTCAGCCTCCTGATATCAAGATGTTTTCAGACATTGTGGCCTCCAGTTTCTCCTCTGCCATCGTGGGGTACGCAGTGGCTGTCTCCATACCCACTGACATTGACAGGCTGTCTTGA

Function

GO:

id name namespace
GO:0009651 response to salt stress biological_process
GO:0055081 anion homeostasis biological_process
GO:0055085 transmembrane transport biological_process
GO:0008272 sulfate transport biological_process
GO:0006821 chloride transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008271 secondary active sulfate transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012970 True 522 mRNA 0.45 5 15317093 15324723

Neighbor

gene id symbol gene type direction distance location
AMCG00012971 NA coding downstream 12722 15267214 ~ 15304371 (-)
AMCG00012964 NA coding downstream 83986 15219333 ~ 15233107 (-)
AMCG00012958 NA coding downstream 104761 15176288 ~ 15212332 (-)
AMCG00012959 NA coding downstream 142845 15165950 ~ 15174248 (-)
AMCG00012956 NA coding downstream 237718 15078098 ~ 15079375 (-)
AMCG00012965 NA coding upstream 16434 15341157 ~ 15354156 (-)
AMCG00012968 NA coding upstream 30368 15355091 ~ 15373666 (-)
AMCG00012966 LOC107734741 coding upstream 51753 15376476 ~ 15378948 (-)
AMCG00012967 NA coding upstream 81042 15405765 ~ 15412645 (-)
AMCG00012969 NA coding upstream 153163 15477886 ~ 15485986 (-)
G41243 NA non-coding downstream 38781 15237290 ~ 15278312 (-)
G41224 NA non-coding downstream 81231 15235620 ~ 15235862 (-)
G41191 NA non-coding downstream 239273 15075434 ~ 15077820 (-)
G41138 NA non-coding downstream 394777 14842243 ~ 14922316 (-)
G41102 NA non-coding downstream 580464 14733735 ~ 14736629 (-)
G41369 NA non-coding upstream 241786 15566509 ~ 15569851 (-)
G41386 NA non-coding upstream 314156 15638879 ~ 15639990 (-)
G41402 NA non-coding upstream 465569 15790292 ~ 15822009 (-)
G41442 NA non-coding upstream 630712 15955435 ~ 15956038 (-)
G41443 NA non-coding upstream 631376 15956099 ~ 15959544 (-)
AMCG00012931 snrpf other downstream 972621 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 2201606 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 2410760 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 3045304 12240396 ~ 12271789 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 4454771 10857881 ~ 10862322 (-)
AMCG00012985 NA other upstream 394790 15719513 ~ 15722457 (-)
AMCG00013018 NA other upstream 1305508 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 2555502 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 2605175 17929898 ~ 18046714 (-)
G41807 NA other upstream 2851338 18176061 ~ 18191522 (-)

Expression


Co-expression Network