AMCG00012971



Basic Information


Item Value
gene id AMCG00012971
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15267214 ~ 15304371 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00012971
ATGTTGTCGGTCCTGGCAGCCATCGTCATCGCCAACCTCAAAGGAATGTTCATGCAGGTTCTGGATGTTCCTCTCCTCTGGAAGCAGAACAAAACCGACTCTATAATTTGGGTCTTTACCTGCATTGGATCCATAATCCTGGGACTCGACCTTGGGCTCCTGGCAGGTGTGGTGTTTGAAATGGCCACAGTGGTGGTTAGAACCCAGTTCCCCTCCTGCTCCGCCCTTGCCAACGTCCCAGGCACAGACCTCTATAAGAACATTAAGGACTACAAGAATCTTAGAGAAGAACCGGGAATAAAAATCTTCAAATGCAATTCTCCCATCTACTTCGCCAATATCGATTTCTTTAGAGACCGCTTGAAGGCAATCGTGGGGGTGGACGCAGTGAGAGTTCATAAGAAGAGGACCAAGGCCCTGAAGCAGATACAGAGACTCATTAAGAAGGGAAGGTTAAGAGCTACTaagAATGGCGTGGTGTCAACTACAGGCATTGACATCAAGGCCTTTAAGAAAGACAAGGACCCGGAGGAAGTGGAGGACAATGAAATCCCCAGCACACAGGTTGACATACAGGTGGACTGGAATGCCGATCTGCCGGTGAAAGTGGCTGTGCCAAAAGTTCATATCCACAGCCTCATCTTGGATTTTTCAGCTGCATCCTTTCTTGATGTCGTGTCTGTGAAGTCCTTAAAGCTGCCTGTGTGTTTGGATCTACTTCACCCCTTCTTCTTCCGCTCCTCTGGCTCTTTCTCCCCTCTTGGACTTGGTCGATGGACCGGCCTATGCTGTTCGGACCTCGTGGATTTGGAGGCTTAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00012971 True 819 mRNA 0.49 8 15267214 15304371

Neighbor


gene id symbol gene type direction distance location
AMCG00012964 NA coding downstream 34107 15219333 ~ 15233107 (-)
AMCG00012958 NA coding downstream 54882 15176288 ~ 15212332 (-)
AMCG00012959 NA coding downstream 92966 15165950 ~ 15174248 (-)
AMCG00012956 NA coding downstream 187839 15078098 ~ 15079375 (-)
AMCG00012955 tspan12,LOC102782178,LOC108228819 coding downstream 201601 15051963 ~ 15065613 (-)
AMCG00012970 NA coding upstream 12722 15317093 ~ 15324723 (-)
AMCG00012965 NA coding upstream 36786 15341157 ~ 15354156 (-)
AMCG00012968 NA coding upstream 50720 15355091 ~ 15373666 (-)
AMCG00012966 LOC107734741 coding upstream 72105 15376476 ~ 15378948 (-)
AMCG00012967 NA coding upstream 101394 15405765 ~ 15412645 (-)
G41224 NA non-coding downstream 31352 15235620 ~ 15235862 (-)
G41191 NA non-coding downstream 189394 15075434 ~ 15077820 (-)
G41138 NA non-coding downstream 344898 14842243 ~ 14922316 (-)
G41102 NA non-coding downstream 530585 14733735 ~ 14736629 (-)
G41088 NA non-coding downstream 549650 14717234 ~ 14717564 (-)
G41369 NA non-coding upstream 262138 15566509 ~ 15569851 (-)
G41386 NA non-coding upstream 334508 15638879 ~ 15639990 (-)
G41402 NA non-coding upstream 485921 15790292 ~ 15822009 (-)
G41442 NA non-coding upstream 651064 15955435 ~ 15956038 (-)
G41443 NA non-coding upstream 651728 15956099 ~ 15959544 (-)
AMCG00012931 snrpf other downstream 922742 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 2151727 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 2360881 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 2995425 12240396 ~ 12271789 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 4404892 10857881 ~ 10862322 (-)
AMCG00012985 NA other upstream 415142 15719513 ~ 15722457 (-)
AMCG00013018 NA other upstream 1325860 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 2575854 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 2625527 17929898 ~ 18046714 (-)
G41807 NA other upstream 2871690 18176061 ~ 18191522 (-)

Expression



Co-expression Network