AMCG00012972


Basic Information

Item Value
gene id AMCG00012972
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15526034 ~ 15531609 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012972
TCTCCCTCTATtttgctctgtctctctctgtcccatgtttgttttcctctatTCCTCTTCTCATTTTTAGTTTGTACGTTAGGGGATCTTCATGGCTTCTCCAGGGTCTTACAGCGTTGTCATCATCCCACTGCAGAGCAGCTCGCACAGTGCACTTCAGTTCTTCCTCTGGCTGAAGAGGATGAAGGaactggagagggagaaggacaGTTTGTACAGTGGGCTGGAGGTACTGGACCAAGCTCACCGCTGGTTCTGTCACCGTATCTGGGAAATACAACGTAAACAGCTACCCACTGAGGCCGAAAAGGTGAATGCCTCTGAGCCCAGCCTGTATGACTCCAATATCCAGAGAATGAAAGCATGTCTTGGTAGCTTAATCTGTGAGTCTGCTGTGCAGGAATCCTGTGTTTGTAGAGTGGTGAGAGACTCCCTCACACACCGGAACAGACTGCTGCGCCAGGCCGTAAAGGAGAGAAACCTGCAGATATCCCTCCTGGAGCTGGAGAAAGAGCAGCTACTGCTGCAGCTGTCCCAGCTCAGAGGGAGCCGCACAACGGAGGGACTCATTCTGTGACTCTCTCCATTCTGTCCAAAGCACATTTGATCTTtgttcctgtgtttgtgtgcattcattttccttttagtCTTGATACTTTCTTTTACAAAGTATTCTTACTGCCTCTGAGATCTGGCACACTGAAGAAGCTGCAGTTTCTCAGCCACAGCCACAGAACACAAAACTAAGCAAATTCTGAGCTTTTACAGAGGGACCCAGTCGTGTGTGCTGCACTGATCATGGCACAGGTATTGCACACCCCCTACACCCCCAACAAACCCACTCTGACCCAGTTAAATTCAGTTGAAGAGTTCTATGTATGTCCAGCAGAGGGAGATATATTATAATTTCCCACCCCACAACTGTTGTGTTCCTCTCAAATCTATGACACTACTGTCTGCTTGATCTCAGAATGCAGGTGATTATACTTCCTATTGAAAGGGATTACATTGTCATTCCTGATGTATTGTAATGTTACTGTAGTCTTCCATGGTTCATGGACAATATATCAGACATAGGGACACATGAATAAGGCACTGTTGAAGACCCTGTACTTATATACAGTGAAATTAGGCTTTATTCTTtcactcaaaataaatacaatattttggaataagtttaatgttttttatttgatttttatttatgtattttgtaataaaatgtttttactgaTCCTCTAATCAGAACATAGAGGTTCAGTACAGAATGTGGCCCCCTCTCAATCTGGTTGTTTTAGCATGATGCCCTAATTTCGTCTCTTTATTACACCCCTTAATATGAGTTTGATGAAGATAtagcatatttgtttatttaatgtattaatttatttggtttaacAATATTAATGCAACCACGGAATCACACCATTATGGTGTTCAATTTTTATTACtcaattaccatttatttttaaataataagccATAACTTCACCATTTACATTGTCTGTATTTTGAAGGAATGTTGGTTTGttcgattttttttaaacaaaaatataaataaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012972 True 1563 mRNA 0.41 4 15526034 15531609

Neighbor

gene id symbol gene type direction distance location
AMCG00012963 cog5,LOC106609192 coding upstream 50164 15420843 ~ 15475870 (+)
AMCG00012960 NA coding upstream 246787 15274952 ~ 15279247 (+)
AMCG00012962 NA coding upstream 265109 15260248 ~ 15260925 (+)
AMCG00012957 NA coding upstream 301521 15212988 ~ 15224513 (+)
AMCG00012953 NA coding upstream 374211 15145480 ~ 15151823 (+)
AMCG00012974 NA coding downstream 14026 15545635 ~ 15554052 (+)
AMCG00012980 NA coding downstream 84648 15616257 ~ 15618444 (+)
AMCG00012983 NA coding downstream 99817 15631426 ~ 15639738 (+)
AMCG00012986 NA coding downstream 173989 15705598 ~ 15715080 (+)
AMCG00012988 sap30bp,LOC107725325 coding downstream 312244 15843853 ~ 15859012 (+)
G41265 NA non-coding upstream 42713 15480691 ~ 15483321 (+)
G41230 NA non-coding upstream 238218 15285341 ~ 15287816 (+)
G41225 NA non-coding upstream 240746 15237287 ~ 15285288 (+)
G41226 NA non-coding upstream 261461 15248378 ~ 15264573 (+)
G41184 NA non-coding upstream 359565 15160436 ~ 15166469 (+)
G41282 si:dkey-180p18.9,akr1b1,LOC107729832,LOC107690495,LOC107587162,LOC107725652 non-coding downstream 24537 15556146 ~ 15559305 (+)
G41303 NA non-coding downstream 187898 15719507 ~ 15722866 (+)
G41325 NA non-coding downstream 327455 15859064 ~ 15859370 (+)
G41469 NA non-coding downstream 541905 16073514 ~ 16074099 (+)
G41484 NA non-coding downstream 589834 16121443 ~ 16124871 (+)
AMCG00012961 NA other upstream 208690 15297962 ~ 15317344 (+)
AMCG00012954 NA other upstream 389305 15081419 ~ 15136729 (+)
G41059 NA other upstream 892621 14632357 ~ 14633413 (+)
AMCG00012940 LOC107748465 other upstream 996228 14516783 ~ 14529806 (+)
G40999 metap2,LOC108428789,LOC100194705 other upstream 1092833 14428313 ~ 14433201 (+)
AMCG00012973 NA other downstream 34884 15566493 ~ 15569943 (+)
AMCG00012978 NA other downstream 39297 15570906 ~ 15573468 (+)
AMCG00012982 ssbp1,LOC106576077,LOC106609216 other downstream 89126 15620735 ~ 15631003 (+)
AMCG00012987 NA other downstream 250755 15782364 ~ 15791627 (+)
AMCG00013015 NA other downstream 1187746 16719355 ~ 16729533 (+)

Expression


Co-expression Network