AMCG00012975 (pik3cg,LOC106609208,LOC107656384,LOC107583938,LOC107590535)


Basic Information

Item Value
gene id AMCG00012975
gene name pik3cg,LOC106609208,LOC107656384,LOC107583938,LOC107590535
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15512472 ~ 15522929 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012975
GCGCGTATCCCCGGAGAGACGGACACAAAGTTGCTCGCTTTCCTTATCAGCATGACTGCCAGCTGCCAGCCAGCCCTGCAGCAGCACTGTCACGGGCGCCTGTGTTTTATAGCCTCTTGCTAGGTATCACCGGTTATGGAACACCACGAAGATGATAAACAACCTGTAGTTTTTAGAGAGGAGAAcaagagaaggaggaggaagatgaaaGCTTTTACCTCAAATGCTTTAGTTGCAATGGATCAAATAGCCATTGAATTTATATTGCCCACATCCAACAAATGCAATAAAGTACCAGAAAGCCTAATTCTTGACATTGCAGGGAACTGTACAGTCGACCAGGTTAAAACTCAAGTGTGGATGAAAGCAGTTTCAGCAAACCTGTGTCCGGAGTTTTATCAGACTTATACTCCTGACCAGTGCATTCTGCTTTATCAGAAGAAGGGACACTGGTATGAGATATATGACAAACACCAGGTATTTCAGACACTGGACTGCATACGCTACTGGAGAGCACTGAAGAAAGATCTAGGAAGAATCCATTTGGCTTCCAGACCGCAACCAACAGAAGAATCAAAGCAGTATCAAAATTACTTGAATTATCTGATTGGTTATGATGTCACAGATGTGAGCAACGTGCATGACGATGAACTGGAATTCACTAGGAGAAAGTTATTGACGCCAAGGATTATTGAACTAACAGACCGGGACCCCAACCTTTATTCCATGGACCCCTGGATAACATCAAAGCCTCTTCCAGAATACCTACTGAGTAAGATCAGCAATAATCATATTTTAGTTGTCATACACAGACATTCTGCAAGTCAGACCATAAAGGTGTCCATTGATGACACTCCTCAACAGATTCTTCAGACTTTCTTCACCAAGATTGCCAAGAAACGGGCATTACTTGGCATTCCAGAGGAGGTCAGTGAAGTGGATTTTGTTCTGAGAGTCTGCGGTCGGGAAGAGTACATTTTTGGTAACCATGCCATTAAGAATTTTTACTGGGTGAGACAGTGCCTGAAAAATTCTGAAGAGATCCACCTGGTTCTGGAGTCTGCGCCAAACCCTGACCAGGATGTGGTTCAGCTGGAAGACTGGTCGCTCGTTGACGATCGCACAGGTGTTGCTGGCTCCCATGAACAACTGACCATTGATGAAAAAGACCATGAGAAAGTGTTCACTATTTCCATGTGGGACTGCAACAGAAAATTTCGTGTCAAGGTTCTCGGCATAGACATTCCTGCCCTGCCTCGAAACTCtgaattgattgtttttgtggAGGCCACTATTTTCCATGGACAGCAGCTGCTGGCACAGGAGAGGACCTCCTCGAAGCCATTCACCGAGGAGGTGCTTTGGAACGCATGGCTGGAGTTTAACATCAAGATTAAAGACCTGCCCAAAGGCGCTCGGCTAAGCTTGCAGGTGTACTGTGGGAAGGCTCAAACTCAGACGGCCAAGACGAGTTATCAGGAAAGCGTCAACCACGATTCCAAATGCAAGAACCGCTTACTGTATTACGTCAACCTCATGCTGGTAGACCACCGGTCACTCCTGAGGCAAGGCGAGTACATCCTGCACATGTGGAAGATGCCGGAGAAGAGCGAAGATCACAGCAGTGTCAATGCAGACAAGCTCACCTCTGCCACCAACCCTGACAAAGACAACTCTCTGGCCATAGCCATACTATTGGATAAGTATTGTTACCCCATCGCTCTTCCAAAAAGTCGGGATTCTGTGGAGGTGGAAGGGGAAAGGGGGAAGCGGGAGATGCCGAATCACCTGCGCAAGCAGTTTGAGCAGATCGTCAGAACTGACCCCCTGCACCCACTGAGCCCAGAGGACAAGGAACTGCTGTGGCACTTCAAGCAAGAGTGCATGAGATTCCCTAAAGCCTACCCCAAATTTCTGAGCTCTGTGAAATGGGGGAAACATGAAGCAGTGTTGGCCACACATCAGCTGCTAGAGAAATCTGATACATGGGATCGCAGTGCTCTGGACGTGGGCCTGGCCATGCAGCTGCTGGACTGCAACTTCTCGGATGCGAATGTCCGTACGATGGCTGTGAGGAAGCTGGAGACCCTGGGAGATGATGACGTGCTGCGTTACCTCCTCCAGCTCGTGCAGGCTGTGAAGTTTGAACCGTATCATGACAGTGCCTTGGCTCGATTCTTACTCAAGCGTGCTCTGAGGAGCAAGAGAATCGGGCACTTCCTGTTCTGGTTCCTGCGCAGCGAGATCGCTCAGTCTATGCACTACCAGCAGAGATATGCTGTGATCCTGGAGGCCTACCTGCGGGGGTGCGGGGAGTCCATGCTGCAGGACTTCAAGAAGCAGGTGGAAATCACAGAGGCCCTCCAGAAAGTCACCAAGGAAATAAAAACGATGTCTGCTGACAAATATGACGTCTCAGTGCAAGttgtttttcagCTGCGTCAGAAGCTTGAAAATTTGCAGTCGTCGGGTCTTCCAGAGAGCTTCAAAGTTCCGTATGACCCTGGACTGCGAGCCGGAGCTCTTGTGATCGAGCAGTGTAAAGTGATGGCTTCCAAGAAGAAACCACTGTGGCTACAGTTCAAGCGAGCCGACCCCACCACCCTGTCCAGCGACAGCATCGGAATCATCTTCAAAGATGGGGATGACCTCCGACAGGACATGCTTATCTTACAGatTCTTCTGATAATGGAGTCGATTTGGGAAGCAGAATCTTTGGACCTGTCTTTGTTACCATATGGTTGCATTTCTACCGGAAATAAGATAGGGATGATTGAAATAGTGAAAGATGCCACAACCATCGCTAATATTCAGCAGAGCACAGTTGGCAATACTGGAGCATTTAAAGATGAAGTTCTGAACCAGTGGCTGCGAGACAGATGTCTTGAGGACAAGTTTCAGGTAGCCGTGGAGAGGTTTGTCTACTCCTGTGCCGGCTACTGTGTTGCCACCTATGTTCTGGGGATTGGAGACAGGCACAATGACAATATTATGATTACAGAGTCGGGGAACCTGTTCCACATCGATTTCGGACACATTCTTGGAAATTACAAGAGCTTCCTTGGCATAAACAAGGAAAGGGTCCCTTTTGTGTTAACGCCAGATTTCCTTTACGTCATGGGAACATCTGGCAAGAAAACCAGCCCCCATTTCCAGAAATTCCAGGAGATCTGTGTCAAAGCGTACCTGGCCTTGCGGCATCACACCAACCTCCTTATCATCCTCTTCTCCATGATGCTGATGACAGGCATGCCACAGCTCACCAGTAAAGAGGACATTGAGTACATCCGGGAGGCGCTGACCGTAGGAAAGACAGATGAGGAAGCACAGAAGCATTTTCTGGATCAGATTGAAATCTGCCGGGACAAGGGCTGGACTGTGCAGTTTAACTGGTTTCTGCATCTTGTCCTGGGCATCAAGCAGGGGGTGGAGAAGCGCTCGGCCTAACTTCCTCCTGGCTGTGCTCTGTCTGTTACTTGTGTCTCCTGCATTTAAAGTAACATCAGCCCCCCTGCAGTTATGACTTGATAAAGTATCACGTGTATATCATGCCAAGGTAAAACTCTCAGGCTTGTATAAAGAAAGGGTAAAACTCTTACTTGTGCTTAAATTCAGCTTTTAAATGCACTAGATTTCAGGCAGTCAAGGTGGAGCTGTCTGTAATCTAAGGTAAATCCCCAGGAAAAGCCATATCAAGACACACataaaagaatgaaacaaatgcTTGAATCTTTGCAATATTAAGAGTAGTTATTTCCTAAACTAACAGGAAGACATGTAAAAACACACCCTATAAGATATAGCTGTGAATTGAGTAATTTGCATTAGTGCCAATTTCTCTTCCAAAACCAGAACtgcagagaaatgtattttgtggaCTATACGACCAAAACATCATGAGAAAAACGGtagtttacattttcttaagttaacttattgaagaatgcattttttacaacatatacatatttttagatCACGTAAAAATTGAAACCATTTGACTAAATGTTGACTTCGTTtaggatgtttctttttttatatatatatatatatatatatatatatgtcttaaTTGAGGGTGGATGCATTGGAAAAGGTCGTACGGTGACAAGTTTCAGATGGTGAAAAGGAACAACATTCGGTTATTAATCACGGTTGCAGCTTTTTACTCACCTTGCTGAAATTTGCATCCACTGCTTGTGTATGAATATAAGAAGGATTGTTTCAAAATGTGAGTTAATTTAATAGACTAATGAGGTAGTGTAGTACAGATATTATAATAACATTGCATTGCTCCTATTTTTATCTACAGAATTTTTATATGTACAGAAAGCTTTAGATCTATTTTTAACAAATCAATATCCTCCACAATGTTGTCATACTGACTGAAGCAGTAAAAAAcctgtatgtttgttgttgtcagtgatgcagatgattttgtttttgagctgaaacgttttcattattttcactaGAATTTCACTCCCTTCATCCCTTAGCTTTCagggaattttattttattttatgtgtttcatCAATCATTTGTTAGGACCATGTTTGGTATATCGTGTAGGTAATGTGAGATTAATTTGCATCATGTGTACTGTGATTTTAATATGCAGTTTTATATTCAGAAGTGCCCGTGGATCGAACAACTGAATTTAAACATGAAAGGTTTCTCTGTAATCCAAGATGCTCACCATGAAATTCACTGAAGTGCCTTCTAAACTACTTCTGTTTGAAAATGCTTAAACCAGCTATCCCAATGCTATGTAGGCATTAATCAGGAACATAGCACAATGAATGtctgaaaaaaaatcttatttggAACCAATGGAGGGATTTGCTTGAAAGTTAGCAAATGTCATCAACaatatatatcccatatattttaaatatacaaaaagggaacaAGTACCAATTTTGGCATATAAGAAATATATGGATCACACAGTTCTACCATACCTTAAATGTTTGATTGTTCTATGTGGTGCTTGCAGAtgcttacaaaatgtaaaatgctaataattCCTAGCATTTACCAAAGATTAGTCTGGATCAATCTCACAAATCAGCcaacattgtaaaagctaaTGCATATTATACTAAcacaattacattacaaattactaTTTAAGAATAGGACATACACTTGCAAAAAGCATGTCCAGCACTGGGTGTTTAAAGTTTTAGTCTTGTTTGGTGTTGCGTATTGGCAATTAACTGAACGTAAATATCATAGTAGATATTTTTGCTTGAAATTTctttatgaaaatgcattttggatGTTTTTTAAACCCTAAATGTTAGCACTTTTTTAGAGCATGAATAATGTTTTGCAATCAATTTTGTGTTAAGGAATAAAGGCATAAGCAGTTTTAtatta

Function

symbol description
pik3cg Predicted to enable 1-phosphatidylinositol-3-kinase activity and 1-phosphatidylinositol-4-phosphate 3-kinase activity. Acts upstream of or within neutrophil chemotaxis. Predicted to be part of phosphatidylinositol 3-kinase complex, class IA and phosphatidylinositol 3-kinase complex, class IB. Predicted to be active in cytoplasm and plasma membrane. Human ortholog(s) of this gene implicated in autistic disorder and swine influenza. Orthologous to human PIK3CG (phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma).

NR:

description
PREDICTED: phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform

GO:

id name namespace
GO:0046854 phosphatidylinositol phosphorylation biological_process
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process biological_process
GO:0048015 phosphatidylinositol-mediated signaling biological_process
GO:0030593 neutrophil chemotaxis biological_process
GO:0005886 plasma membrane cellular_component
GO:0005942 phosphatidylinositol 3-kinase complex cellular_component
GO:0035005 1-phosphatidylinositol-4-phosphate 3-kinase activity molecular_function
GO:0005524 ATP binding molecular_function
GO:0046934 phosphatidylinositol-4,5-bisphosphate 3-kinase activity molecular_function
GO:0016303 1-phosphatidylinositol-3-kinase activity molecular_function

KEGG:

id description
K21289 PIK3CG; phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012975 True 5386 mRNA 0.43 11 15512472 15522929

Neighbor

gene id symbol gene type direction distance location
AMCG00012977 prkar2b,LOC101073002 coding downstream 2950 15492361 ~ 15509522 (-)
AMCG00012969 NA coding downstream 26486 15477886 ~ 15485986 (-)
AMCG00012967 NA coding downstream 99827 15405765 ~ 15412645 (-)
AMCG00012966 LOC107734741 coding downstream 133524 15376476 ~ 15378948 (-)
AMCG00012968 NA coding downstream 138806 15355091 ~ 15373666 (-)
AMCG00012979 ascl4 coding upstream 13740 15536669 ~ 15537223 (-)
AMCG00012976 si:dkey-180p18.9,LOC107725652 coding upstream 31270 15554199 ~ 15565616 (-)
AMCG00012981 slc13a4 coding upstream 48064 15570993 ~ 15595338 (-)
AMCG00012984 NA coding upstream 203065 15725994 ~ 15758670 (-)
AMCG00012989 NA coding upstream 281028 15803957 ~ 15808685 (-)
G41243 NA non-coding downstream 234160 15237290 ~ 15278312 (-)
G41224 NA non-coding downstream 276610 15235620 ~ 15235862 (-)
G41191 NA non-coding downstream 434652 15075434 ~ 15077820 (-)
G41138 NA non-coding downstream 590156 14842243 ~ 14922316 (-)
G41102 NA non-coding downstream 775843 14733735 ~ 14736629 (-)
G41369 NA non-coding upstream 43580 15566509 ~ 15569851 (-)
G41386 NA non-coding upstream 115950 15638879 ~ 15639990 (-)
G41402 NA non-coding upstream 267363 15790292 ~ 15822009 (-)
G41442 NA non-coding upstream 432506 15955435 ~ 15956038 (-)
G41443 NA non-coding upstream 433170 15956099 ~ 15959544 (-)
AMCG00012931 snrpf other downstream 1168000 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 2396985 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 2606139 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 3240683 12240396 ~ 12271789 (-)
AMCG00012856 lsm8,LOC107592220,LOC107580766,LOC107656302 other downstream 4650150 10857881 ~ 10862322 (-)
AMCG00012985 NA other upstream 196584 15719513 ~ 15722457 (-)
AMCG00013018 NA other upstream 1107302 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 2357296 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 2406969 17929898 ~ 18046714 (-)
G41807 NA other upstream 2653132 18176061 ~ 18191522 (-)

Expression


Co-expression Network