AMCG00012989


Basic Information

Item Value
gene id AMCG00012989
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 15803957 ~ 15808685 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00012989
ATGAACTCAAACTGCAAGATCATGCGCTGCCTGAAGACGGTCTTCGGATTCGACTCGTTTCGATCGGCGCTGCAGGAAAAGGCGGCCAGGGCGGTGGTACAGGGAGAGAAGGATGTGTTCGTGTGCATGCCAACCGGTGCTGGGAAATCGCTGTGTTACCAGTTGCCAGCTGTGTTGGCAAAGGGAATCACTATGGTCATCTCTCCTCTAATCGCACTCATTCAGGATCAAGTGGATCACTTGCAGAGCCTGAAAGTGGCTGGGTGCACGATGAACTCGAAGATCCCTCAGGAGGAGCGGCGGAGGATCCTGGCAGACTTAGAGAGTGAGAGTCCACAACTCAAGCTGCTATACGTCACCCCAGAGATGGCCTCCTCGTCTTCATTCCAGCCATGCCTGGCCTCGCTGGTCTCCCGCAGTCTCCTGTCCTACCTTGTGGTGGATGAGGCCCATTGTGTTTCCCAGTGGGGCCATGATTTCCGACCCGACTTCCTAAAGTTGGGCGATTTGCGTAGCCGCCTGCCGGGGGTGCCCTGTGTGGCCCTCACTGCCACTGCCAACAAGAGGGTGCAGGAGGACATCACCCACAGTCTCCGTCTCCATCAGCCCCTCTCCTTCCAGACCTCTGTCTTCCGGGACAACCTCTTCTATGATGTTGTATTCCGTGATCTGCTGCCTGACCCGTACAGCAACTTGCAGGCCTTCTGTCTACAAGCACTAGGAGGCAAGGCAGCTGATGGGGGCTCTTCAGGCTGTGGGATTGTTTACTGCCGGACCAGAGAGAGCTGTGAGGATGTGGCACATAAACTCTGCCAACTTGGTGTATCTGCCAAGCCTTATCATGCAGAACTAAGGATGTTTTCAGGTCTGAAAGCTGGTGACCGCACTGACACGCAGAACGAGTGGATGGATGGCAAGGTGACTGTCATTGTGGCCACTGTTAGCTTTGGCATGGGTGTAGACAAGGCCAACGTCAGGTCAGTTTGCCACTCTCTGTGCATCGAGTGA

Function

GO: NA

KEGG:

id description
K10902 RECQL5; ATP-dependent DNA helicase Q5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00012989 True 1008 mRNA 0.55 5 15803957 15808685

Neighbor

gene id symbol gene type direction distance location
AMCG00012984 NA coding downstream 45287 15725994 ~ 15758670 (-)
AMCG00012981 slc13a4 coding downstream 208619 15570993 ~ 15595338 (-)
AMCG00012976 si:dkey-180p18.9,LOC107725652 coding downstream 238341 15554199 ~ 15565616 (-)
AMCG00012979 ascl4 coding downstream 266734 15536669 ~ 15537223 (-)
AMCG00012975 pik3cg,LOC106609208,LOC107656384,LOC107583938,LOC107590535 coding downstream 281028 15512472 ~ 15522929 (-)
AMCG00012995 NA coding upstream 105543 15914228 ~ 15924404 (-)
AMCG00012994 h3f3b,LOC106912265,LOC107377396,LOC106963510 coding upstream 142151 15950836 ~ 15955239 (-)
AMCG00012999 NA coding upstream 162447 15971132 ~ 15999882 (-)
AMCG00012997 NA coding upstream 210045 16018730 ~ 16021747 (-)
AMCG00012998 NA coding upstream 229198 16037883 ~ 16074028 (-)
G41386 NA non-coding downstream 163967 15638879 ~ 15639990 (-)
G41369 NA non-coding downstream 234106 15566509 ~ 15569851 (-)
G41243 NA non-coding downstream 525645 15237290 ~ 15278312 (-)
G41224 NA non-coding downstream 568095 15235620 ~ 15235862 (-)
G41191 NA non-coding downstream 726137 15075434 ~ 15077820 (-)
G41442 NA non-coding upstream 146750 15955435 ~ 15956038 (-)
G41443 NA non-coding upstream 147414 15956099 ~ 15959544 (-)
G41444 NA non-coding upstream 150991 15959676 ~ 15960333 (-)
G41445 NA non-coding upstream 152672 15961357 ~ 15961841 (-)
G41448 NA non-coding upstream 157252 15965937 ~ 15966308 (-)
AMCG00012985 NA other downstream 81500 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 1459485 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 2688470 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 2897624 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 3532168 12240396 ~ 12271789 (-)
AMCG00013018 NA other upstream 821546 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 2071540 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 2121213 17929898 ~ 18046714 (-)
G41807 NA other upstream 2367376 18176061 ~ 18191522 (-)
G41836 NA other upstream 2434065 18242750 ~ 18244093 (-)

Expression


Co-expression Network