AMCG00013002



Basic Information


Item Value
gene id AMCG00013002
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16081261 ~ 16085241 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00013002
CCCACATTCTCACAGACCCCGAAGTTCATCTCCCTTCAAAAGGAAAACTCATCGGCTGAAATCCACTGTGTTACTTCAGTAAAGGGCTTGGATGGGTTGTATTTGAAGCGTCGCTATGCCAAAAAAATTGACGTTCTTTACTTATCCTTTGATTTCCTTAAAGAAACAGTGGGGGATCTGTATAAAAATCGAATCACTATAAAAGGCCAATGCTGCGATTTTGTGATCATCCTCTCCCAGCTCACAGTCAGTGACAaaaaagaaaagctataAACCAGCTAAAATCaaccagaaaagaaaacacatttgtctcCAGCACCAAGGCCAAGAAAAGACCTATCCTTTAAAATGCTAAAGACTGGCTGAACATATTACAGGGtggttaaaatgtgttatttcaccATCTGAGTCAGTTTAAACAGcttgtcaaaatgtaattaattcccAAAGCACTGTGAGGGGCAACaactaaaataagtaaaaagacaaatgttttatattttcttggACTGATAATCATAATATCTATGTCATCGGTTGAGAGTTTTGATGACcaaaagacatttgttttactgaaagCTTCACTGCCTTTTGGAggctatatattaaatataatgccAAGTAGCTAAGAAGTTCATACTTATATAAAAACTGTACATGTCTGCCTGTAAATCAGGTTTCCCTAATCACTTGAACTGTTGTGTTGCTTAATAGGGTAATCCAGCAGTTTCTTTTGCATCTGCAATGTACATTTCTGCTTATTGCCATCTTTCAATATTAcctcattatattttaatacattttttgggggggttggg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00013002 True 818 mRNA 0.36 2 16081261 16085241

Neighbor


gene id symbol gene type direction distance location
AMCG00012998 NA coding downstream 7233 16037883 ~ 16074028 (-)
AMCG00012997 NA coding downstream 59514 16018730 ~ 16021747 (-)
AMCG00012999 NA coding downstream 81379 15971132 ~ 15999882 (-)
AMCG00012994 h3f3b,LOC106912265,LOC107377396,LOC106963510 coding downstream 126022 15950836 ~ 15955239 (-)
AMCG00012995 NA coding downstream 156857 15914228 ~ 15924404 (-)
AMCG00013004 NA coding upstream 15075 16100316 ~ 16104419 (-)
AMCG00013001 NA coding upstream 23374 16108615 ~ 16128233 (-)
AMCG00013003 NA coding upstream 61002 16146243 ~ 16154855 (-)
AMCG00013007 LOC108274136,LOC107754112,LOC107743783,LOC107691214,LOC107566616,LOC107568947 coding upstream 164896 16250137 ~ 16251210 (-)
AMCG00013008 LOC101481179,LOC102780800,LOC107388280,LOC103369862,LOC107743796,LOC107577513,LOC107691210 coding upstream 447509 16532750 ~ 16533847 (-)
G41460 NA non-coding downstream 45325 16035647 ~ 16035936 (-)
G41455 NA non-coding downstream 65240 16014136 ~ 16016021 (-)
G41454 NA non-coding downstream 69897 16011012 ~ 16011364 (-)
G41453 NA non-coding downstream 71019 16009836 ~ 16010242 (-)
G41452 NA non-coding downstream 71867 16008942 ~ 16009394 (-)
G41506 NA non-coding upstream 84068 16169309 ~ 16208177 (-)
G41510 NA non-coding upstream 132140 16217381 ~ 16217595 (-)
G41518 NA non-coding upstream 247990 16333231 ~ 16333595 (-)
G41538 NA non-coding upstream 538178 16623419 ~ 16623773 (-)
G41612 NA non-coding upstream 1061474 17146715 ~ 17146981 (-)
AMCG00012985 NA other downstream 358804 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 1736789 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 2965774 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3174928 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 3809472 12240396 ~ 12271789 (-)
AMCG00013018 NA other upstream 544990 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 1794984 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1844657 17929898 ~ 18046714 (-)
G41807 NA other upstream 2090820 18176061 ~ 18191522 (-)
G41836 NA other upstream 2157509 18242750 ~ 18244093 (-)

Expression



Co-expression Network