AMCG00013003


Basic Information

Item Value
gene id AMCG00013003
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030125.1
NCBI id CM030125.1
chromosome length 49972098
location 16146243 ~ 16154855 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00013003
GTTCCTCCTCTACTGCTGAGCTTCTCGCTTGCCCGGCAGCAATGGCCTCTCCATGTGTGGGAAAGAAGTTAGTCCATCTGGATCTGAAAGGGGCCCCTCCCAGAATAGCGTACCTGGCTCAGCTCTTCCCGTTGTTTTCTCAACTTGGTGCTGATGGATTACTCATGGAGTATGAGGACATGTTTCCTTATGAAGGGAGGCTGGAGGTCCTACGGGCTACTAATGCATACAGCCCCGATGAGATCAAGCAGATCCTGGATCTGGCCAAGTCAAATGGTTTGGAAGTGATCCCCCTGGTCCAGACCTTTGGTCACATGGAGTTTGTTCTGAAGCACCAGCAGTTCTCCAGCCTCAGGGAGGTGAGCTGCACCCCCAATGCAATCAACCCCCACAAGGAGCAGAGtctggagctgctgcagtgcCTCACTGACCAGGTGATGGCGCTGCACCCTGAGGCACAATGCCTGCACATCGGGGCTGATGAGGTCCATCTATTGGGGAGTGGGGAGGAGTCGCAAGAGTGGCTCAAAGTCCAAGGCAACAACTTGGACAAGCTTTTTGTGAGTCACGTGAAGAAGGTGGCAGAGAGGGTGCTATCAGCACACCCGCACCTCACCCTGATCATTTGGGACGACATGCTGAGGGGGATGAGCCAGGATCTCCTgaaggATAGTGGGATTGCAGACGTAATCCAGCCGATGATCTGGGACTATAATCCTACACTTGATGTGGAGAGAACAGTCCTTCTGATTGAGAAGTACCAGCAGAGTGGGCTTTCTAAGCTTTGGCTGGCGAGTTCCTTTAAAGGGTCAACGGAGGTCAACCAATCACTGACCTGTATTGGCAATCACCTGGCCAATCACACTCAGTGGCTGAAGGTGGTCACGGCTCTACCCAAAGACACGACAGAGCTGCAAGGCATCGCAATCACAGGCTGGCAAAGGTATGATCatttctctgtgctgtgtgagcTGCTTCCTGTAGGGCTGCCCTCACTGGCAGCCTGTCTGCAGACGTTGCAGCATGGCGAATTCAATGAAGAAGCACAGAGGACCTTCCAGCAAGCTCTGGGAGTTGTTAATGTGGAAGCAGACACGGAGGACTTCGGCAGTTTCCCAGGCAGTGAGGTAGCCAGGCTGATTAACCACATCAATGCCTACCTGAAGTCAACTGTGGATGGCTTCTTGGAGGGGAATAGGTATGCAATTGGTTGGTTCAGTCCATATCATAGAAAGAAAAGGATTGTCCATCCCATAATGCTACAGCAGTTTGAGCCAGAAGCCAAAGGGTTGTTGCTGAAGTGGGAGTTGGTGGCACAGAACCTGCAGGCAGCCATGGATCTCCTGTACTACCCTGACACTGTGGAGGAGTGGCTGGATGAGCACGTCAATCCAGCCCTGGACCCGCTCAGGGGCTTTCTCCAAGATTTGCAAGAGGCAACGGAGCAGCTGTCC

Function

GO: NA

KEGG:

id description
K14459 HEX; hexosaminidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00013003 True 1454 mRNA 0.53 12 16146243 16154855

Neighbor

gene id symbol gene type direction distance location
AMCG00013001 NA coding downstream 18010 16108615 ~ 16128233 (-)
AMCG00013004 NA coding downstream 41824 16100316 ~ 16104419 (-)
AMCG00013002 NA coding downstream 61002 16081261 ~ 16085241 (-)
AMCG00012998 NA coding downstream 72215 16037883 ~ 16074028 (-)
AMCG00012997 NA coding downstream 124496 16018730 ~ 16021747 (-)
AMCG00013007 LOC108274136,LOC107754112,LOC107743783,LOC107691214,LOC107566616,LOC107568947 coding upstream 95282 16250137 ~ 16251210 (-)
AMCG00013008 LOC101481179,LOC102780800,LOC107388280,LOC103369862,LOC107743796,LOC107577513,LOC107691210 coding upstream 377895 16532750 ~ 16533847 (-)
AMCG00013012 NA coding upstream 523305 16678160 ~ 16687304 (-)
AMCG00013011 NA coding upstream 561661 16716516 ~ 16718657 (-)
AMCG00013014 LOC107666920,LOC107706881,LOC107669499 coding upstream 578074 16732929 ~ 16735796 (-)
G41460 NA non-coding downstream 110307 16035647 ~ 16035936 (-)
G41455 NA non-coding downstream 130222 16014136 ~ 16016021 (-)
G41454 NA non-coding downstream 134879 16011012 ~ 16011364 (-)
G41453 NA non-coding downstream 136001 16009836 ~ 16010242 (-)
G41452 NA non-coding downstream 136849 16008942 ~ 16009394 (-)
G41506 NA non-coding upstream 14454 16169309 ~ 16208177 (-)
G41510 NA non-coding upstream 62526 16217381 ~ 16217595 (-)
G41518 NA non-coding upstream 178376 16333231 ~ 16333595 (-)
G41538 NA non-coding upstream 468564 16623419 ~ 16623773 (-)
G41612 NA non-coding upstream 991860 17146715 ~ 17146981 (-)
AMCG00012985 NA other downstream 423786 15719513 ~ 15722457 (-)
AMCG00012931 snrpf other downstream 1801771 14340416 ~ 14344472 (-)
G40778 LOC107575789 other downstream 3030756 13114893 ~ 13115487 (-)
AMCG00012906 kin other downstream 3239910 12896520 ~ 12906333 (-)
AMCG00012888 mkln1,LOC107104017 other downstream 3874454 12240396 ~ 12271789 (-)
AMCG00013018 NA other upstream 475376 16630231 ~ 16639087 (-)
AMCG00013038 NA other upstream 1725370 17880225 ~ 17910017 (-)
AMCG00013042 NA other upstream 1775043 17929898 ~ 18046714 (-)
G41807 NA other upstream 2021206 18176061 ~ 18191522 (-)
G41836 NA other upstream 2087895 18242750 ~ 18244093 (-)

Expression


Co-expression Network